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Zinc in PDB 2bq8: Crystal Structure of Human Purple Acid Phosphatase with An Inhibitory Conformation of the Repression Loop

Enzymatic activity of Crystal Structure of Human Purple Acid Phosphatase with An Inhibitory Conformation of the Repression Loop

All present enzymatic activity of Crystal Structure of Human Purple Acid Phosphatase with An Inhibitory Conformation of the Repression Loop:
3.1.3.2;

Protein crystallography data

The structure of Crystal Structure of Human Purple Acid Phosphatase with An Inhibitory Conformation of the Repression Loop, PDB code: 2bq8 was solved by N.Straeter, B.Jasper, B.Krebs, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.20
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 94.756, 94.756, 144.007, 90.00, 90.00, 120.00
R / Rfree (%) 18.1 / 21.1

Other elements in 2bq8:

The structure of Crystal Structure of Human Purple Acid Phosphatase with An Inhibitory Conformation of the Repression Loop also contains other interesting chemical elements:

Iron (Fe) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Human Purple Acid Phosphatase with An Inhibitory Conformation of the Repression Loop (pdb code 2bq8). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Human Purple Acid Phosphatase with An Inhibitory Conformation of the Repression Loop, PDB code: 2bq8:

Zinc binding site 1 out of 1 in 2bq8

Go back to Zinc Binding Sites List in 2bq8
Zinc binding site 1 out of 1 in the Crystal Structure of Human Purple Acid Phosphatase with An Inhibitory Conformation of the Repression Loop


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Human Purple Acid Phosphatase with An Inhibitory Conformation of the Repression Loop within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Zn1307

b:21.8
occ:1.00
OD2 X:ASP71 1.8 22.4 1.0
OE2 X:GLU67 2.0 16.7 1.0
CD X:GLU67 2.8 19.4 1.0
OE1 X:GLU67 2.9 19.1 1.0
CG X:ASP71 2.9 20.1 1.0
OD1 X:ASP71 3.3 18.6 1.0
CG X:GLN66 4.0 20.8 1.0
CG X:GLU67 4.2 18.0 1.0
CB X:ASP71 4.2 19.7 1.0
NE2 X:GLN66 4.5 24.5 1.0
CA X:GLU67 4.6 18.4 1.0
CD X:GLN66 4.8 23.6 1.0
O X:GLN66 4.9 19.2 1.0
CB X:GLU67 4.9 18.7 1.0
C X:GLN66 5.0 18.9 1.0

Reference:

N.Strater, B.Jasper, M.Scholte, B.Krebs, A.P.Duff, D.B.Langley, R.Han, B.A.Averill, H.C.Freeman, J.M.Guss. Crystal Structures of Recombinant Human Purple Acid Phosphatase with and Without An Inhibitory Conformation of the Repression Loop. J.Mol.Biol. V. 351 233 2005.
ISSN: ISSN 0022-2836
PubMed: 15993892
DOI: 10.1016/J.JMB.2005.04.014
Page generated: Wed Oct 16 22:05:31 2024

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