Zinc in PDB 2bl6: Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs.

The binding sites of Zinc atom in the Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs. (pdb code 2bl6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs., PDB code: 2bl6:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs. within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1059 b:0.0 occ:1.00 NE2 A:HIS32 2.2 0.0 1.0 SG A:CYS37 2.2 0.0 1.0 SG A:CYS27 2.2 0.0 1.0 SG A:CYS24 2.2 0.0 1.0 CD2 A:HIS32 2.8 0.0 1.0 HB2 A:CYS27 2.8 0.0 1.0 HD2 A:HIS32 2.9 0.0 1.0 CB A:CYS27 3.1 0.0 1.0 H A:CYS27 3.1 0.0 1.0 HB2 A:CYS24 3.2 0.0 1.0 CE1 A:HIS32 3.3 0.0 1.0 CB A:CYS24 3.3 0.0 1.0 HB2 A:CYS37 3.4 0.0 1.0 CB A:CYS37 3.4 0.0 1.0 HE1 A:HIS32 3.7 0.0 1.0 HB3 A:CYS37 3.8 0.0 1.0 HB3 A:CYS27 3.9 0.0 1.0 HB3 A:CYS24 3.9 0.0 1.0 N A:CYS27 4.0 0.0 1.0 CG A:HIS32 4.0 0.0 1.0 CA A:CYS27 4.2 0.0 1.0 ND1 A:HIS32 4.2 0.0 1.0 H A:ASN26 4.2 0.0 1.0 HA A:CYS24 4.3 0.0 1.0 HE1 A:TYR25 4.4 0.0 1.0 HD1 A:TYR25 4.5 0.0 1.0 HG3 A:GLN36 4.5 0.0 1.0 CA A:CYS24 4.5 0.0 1.0 HB3 A:ASN26 4.5 0.0 1.0 CA A:CYS37 4.7 0.0 1.0 HH12 A:ARG38 4.7 0.0 1.0 HA A:CYS27 4.8 0.0 1.0 HH22 A:ARG38 4.8 0.0 1.0 H A:TYR25 4.8 0.0 1.0 HB2 A:LYS29 4.9 0.0 1.0 HA A:CYS37 4.9 0.0 1.0 N A:CYS37 4.9 0.0 1.0 O A:GLN36 4.9 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs. within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1060 b:0.0 occ:1.00 NE2 A:HIS51 2.1 0.0 1.0 SG A:CYS56 2.2 0.0 1.0 SG A:CYS43 2.2 0.0 1.0 SG A:CYS46 2.2 0.0 1.0 HE21 A:GLN55 3.0 0.0 1.0 CE1 A:HIS51 3.1 0.0 1.0 CD2 A:HIS51 3.1 0.0 1.0 H A:LYS47 3.3 0.0 1.0 HE1 A:HIS51 3.3 0.0 1.0 HD2 A:HIS51 3.3 0.0 1.0 CB A:CYS56 3.4 0.0 1.0 H A:CYS46 3.4 0.0 1.0 HB2 A:CYS56 3.4 0.0 1.0 HE22 A:GLN55 3.6 0.0 1.0 NE2 A:GLN55 3.6 0.0 1.0 HE1 A:PHE44 3.6 0.0 1.0 CB A:CYS46 3.7 0.0 1.0 HB3 A:CYS56 3.7 0.0 1.0 CB A:CYS43 3.8 0.0 1.0 H A:PHE44 3.8 0.0 1.0 HD1 A:PHE44 3.9 0.0 1.0 HB2 A:CYS46 3.9 0.0 1.0 HB2 A:CYS43 3.9 0.0 1.0 N A:LYS47 4.0 0.0 1.0 H A:LYS45 4.0 0.0 1.0 HA A:CYS43 4.1 0.0 1.0 N A:CYS46 4.1 0.0 1.0 CE1 A:PHE44 4.1 0.0 1.0 ND1 A:HIS51 4.2 0.0 1.0 CA A:CYS46 4.2 0.0 1.0 CG A:HIS51 4.2 0.0 1.0 CD1 A:PHE44 4.3 0.0 1.0 HA A:PHE52 4.4 0.0 1.0 HB3 A:GLN55 4.4 0.0 1.0 HB3 A:PHE52 4.5 0.0 1.0 CA A:CYS43 4.5 0.0 1.0 C A:CYS46 4.5 0.0 1.0 HB3 A:CYS46 4.5 0.0 1.0 HB3 A:CYS43 4.5 0.0 1.0 HA A:LYS47 4.6 0.0 1.0 H A:CYS56 4.7 0.0 1.0 N A:PHE44 4.7 0.0 1.0 CA A:CYS56 4.7 0.0 1.0 CD A:GLN55 4.8 0.0 1.0 H A:GLN48 4.8 0.0 1.0 N A:CYS56 5.0 0.0 1.0 CA A:LYS47 5.0 0.0 1.0

P.Amodeo, M.A.Castiglione-Morelli, A.Ostuni, G.Battistuzzi, A.Bavoso. Structural Features in Eiav NCP11: A Lentivirus Nucleocapsid Protein with A Short Linker Biochemistry V. 45 5517 2006.
ISSN: ISSN 0006-2960
PubMed: 16634633
DOI: 10.1021/BI0524924