Atomistry » Zinc » PDB 2b65-2bmi » 2bl6
Atomistry »
  Zinc »
    PDB 2b65-2bmi »
      2bl6 »

Zinc in PDB 2bl6: Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs.

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs. (pdb code 2bl6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs., PDB code: 2bl6:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2bl6

Go back to Zinc Binding Sites List in 2bl6
Zinc binding site 1 out of 2 in the Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1059

b:0.0
occ:1.00
NE2 A:HIS32 2.2 0.0 1.0
SG A:CYS37 2.2 0.0 1.0
SG A:CYS27 2.2 0.0 1.0
SG A:CYS24 2.2 0.0 1.0
CD2 A:HIS32 2.8 0.0 1.0
HB2 A:CYS27 2.8 0.0 1.0
HD2 A:HIS32 2.9 0.0 1.0
CB A:CYS27 3.1 0.0 1.0
H A:CYS27 3.1 0.0 1.0
HB2 A:CYS24 3.2 0.0 1.0
CE1 A:HIS32 3.3 0.0 1.0
CB A:CYS24 3.3 0.0 1.0
HB2 A:CYS37 3.4 0.0 1.0
CB A:CYS37 3.4 0.0 1.0
HE1 A:HIS32 3.7 0.0 1.0
HB3 A:CYS37 3.8 0.0 1.0
HB3 A:CYS27 3.9 0.0 1.0
HB3 A:CYS24 3.9 0.0 1.0
N A:CYS27 4.0 0.0 1.0
CG A:HIS32 4.0 0.0 1.0
CA A:CYS27 4.2 0.0 1.0
ND1 A:HIS32 4.2 0.0 1.0
H A:ASN26 4.2 0.0 1.0
HA A:CYS24 4.3 0.0 1.0
HE1 A:TYR25 4.4 0.0 1.0
HD1 A:TYR25 4.5 0.0 1.0
HG3 A:GLN36 4.5 0.0 1.0
CA A:CYS24 4.5 0.0 1.0
HB3 A:ASN26 4.5 0.0 1.0
CA A:CYS37 4.7 0.0 1.0
HH12 A:ARG38 4.7 0.0 1.0
HA A:CYS27 4.8 0.0 1.0
HH22 A:ARG38 4.8 0.0 1.0
H A:TYR25 4.8 0.0 1.0
HB2 A:LYS29 4.9 0.0 1.0
HA A:CYS37 4.9 0.0 1.0
N A:CYS37 4.9 0.0 1.0
O A:GLN36 4.9 0.0 1.0

Zinc binding site 2 out of 2 in 2bl6

Go back to Zinc Binding Sites List in 2bl6
Zinc binding site 2 out of 2 in the Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Zn Complex of Eiav NCP11(22-58) Peptide, Including Two Cchc Zn-Binding Motifs. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1060

b:0.0
occ:1.00
NE2 A:HIS51 2.1 0.0 1.0
SG A:CYS56 2.2 0.0 1.0
SG A:CYS43 2.2 0.0 1.0
SG A:CYS46 2.2 0.0 1.0
HE21 A:GLN55 3.0 0.0 1.0
CE1 A:HIS51 3.1 0.0 1.0
CD2 A:HIS51 3.1 0.0 1.0
H A:LYS47 3.3 0.0 1.0
HE1 A:HIS51 3.3 0.0 1.0
HD2 A:HIS51 3.3 0.0 1.0
CB A:CYS56 3.4 0.0 1.0
H A:CYS46 3.4 0.0 1.0
HB2 A:CYS56 3.4 0.0 1.0
HE22 A:GLN55 3.6 0.0 1.0
NE2 A:GLN55 3.6 0.0 1.0
HE1 A:PHE44 3.6 0.0 1.0
CB A:CYS46 3.7 0.0 1.0
HB3 A:CYS56 3.7 0.0 1.0
CB A:CYS43 3.8 0.0 1.0
H A:PHE44 3.8 0.0 1.0
HD1 A:PHE44 3.9 0.0 1.0
HB2 A:CYS46 3.9 0.0 1.0
HB2 A:CYS43 3.9 0.0 1.0
N A:LYS47 4.0 0.0 1.0
H A:LYS45 4.0 0.0 1.0
HA A:CYS43 4.1 0.0 1.0
N A:CYS46 4.1 0.0 1.0
CE1 A:PHE44 4.1 0.0 1.0
ND1 A:HIS51 4.2 0.0 1.0
CA A:CYS46 4.2 0.0 1.0
CG A:HIS51 4.2 0.0 1.0
CD1 A:PHE44 4.3 0.0 1.0
HA A:PHE52 4.4 0.0 1.0
HB3 A:GLN55 4.4 0.0 1.0
HB3 A:PHE52 4.5 0.0 1.0
CA A:CYS43 4.5 0.0 1.0
C A:CYS46 4.5 0.0 1.0
HB3 A:CYS46 4.5 0.0 1.0
HB3 A:CYS43 4.5 0.0 1.0
HA A:LYS47 4.6 0.0 1.0
H A:CYS56 4.7 0.0 1.0
N A:PHE44 4.7 0.0 1.0
CA A:CYS56 4.7 0.0 1.0
CD A:GLN55 4.8 0.0 1.0
H A:GLN48 4.8 0.0 1.0
N A:CYS56 5.0 0.0 1.0
CA A:LYS47 5.0 0.0 1.0

Reference:

P.Amodeo, M.A.Castiglione-Morelli, A.Ostuni, G.Battistuzzi, A.Bavoso. Structural Features in Eiav NCP11: A Lentivirus Nucleocapsid Protein with A Short Linker Biochemistry V. 45 5517 2006.
ISSN: ISSN 0006-2960
PubMed: 16634633
DOI: 10.1021/BI0524924
Page generated: Wed Dec 16 03:18:30 2020

Last articles

Zn in 8PFC
Zn in 8SF0
Zn in 8SOJ
Zn in 8SOK
Zn in 8SYI
Zn in 8SLG
Zn in 8SEX
Zn in 8SEZ
Zn in 8SJG
Zn in 8SEY
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy