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      2a03
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      2a25
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      2a51
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      2a66
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    PDB 6tmn-9nse

Zinc in the structure of Crystal Structure of Cisplatinated Bovine Cu,Zn Superoxide Dismutase (pdb 2aeo)






The binding sites of Zinc atom in the structure of Crystal Structure of Cisplatinated Bovine Cu,Zn Superoxide Dismutase (pdb code 2aeo). This binding sites where shown with 5.0 Angstroms radius around Zinc atom.
The 2aeo structure was solved by V.CALDERONE, A.CASINI, S.MANGANI, L.MESSORI, P.L.ORIOLI, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)44.9-1.8
Space groupP212121
a (A)47.207
b (A)50.920
c (A)146.738
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)20.2
Rfree (%)23.6


Zinc Binding Sites:

Zinc binding site 1 out of 2 in 2aeo


Zinc binding site 1 out of 2 in 2aeo
Click to enlarge		stereopicture of Zinc binding site 1 out of 2 in 2aeo
Click to enlarge		Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Zinc in the PDB 2aeo. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: His61, A: His69, A: Gly70, A: His78, A: Asp81, A: Lys134, A: Thr135, A: Hoh326,

conact list:


AtomAtomDistance (A)
ZnNE2 A:His614.03
ZnCB A:His613.47
ZnND1 A:His612.01
ZnCD2 A:His614.13
ZnCE1 A:His612.90
ZnCG A:His613.06
ZnCA A:His614.98
ZnNE2 A:His694.16
ZnN A:His694.97
ZnCB A:His693.58
ZnND1 A:His692.11
ZnCD2 A:His694.26
ZnC A:His695.00
ZnCE1 A:His693.00
ZnCG A:His693.18
ZnCA A:His694.01
ZnN A:Gly704.84
ZnNE2 A:His783.96
ZnN A:His784.82
ZnCB A:His783.66
ZnND1 A:His782.03
ZnCD2 A:His784.14
ZnCE1 A:His782.80
ZnCG A:His783.15
ZnCA A:His784.89
ZnCB A:Asp814.26
ZnOD2 A:Asp812.93
ZnOD1 A:Asp812.01
ZnCG A:Asp812.81
ZnCA A:Asp814.76
ZnO A:Lys1343.59
ZnC A:Lys1344.58
ZnCA A:Thr1354.97
ZnO A:Hoh3264.49

interactive model:


Zinc binding site 2 out of 2 in 2aeo


Zinc binding site 2 out of 2 in 2aeo
Click to enlarge		stereopicture of Zinc binding site 2 out of 2 in 2aeo
Click to enlarge		Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Zinc in the PDB 2aeo. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: B: His61, B: His69, B: Gly70, B: His78, B: Asp81, B: Lys134, B: Hoh297,

conact list:


AtomAtomDistance (A)
ZnNE2 B:His613.93
ZnCB B:His613.43
ZnND1 B:His611.91
ZnCD2 B:His614.03
ZnCE1 B:His612.81
ZnCG B:His612.97
ZnCA B:His614.95
ZnNE2 B:His694.29
ZnN B:His694.89
ZnCB B:His693.52
ZnND1 B:His692.21
ZnCD2 B:His694.34
ZnC B:His694.94
ZnCE1 B:His693.16
ZnCG B:His693.22
ZnCA B:His693.92
ZnN B:Gly704.88
ZnNE2 B:His784.08
ZnN B:His784.78
ZnCB B:His783.61
ZnND1 B:His782.07
ZnCD2 B:His784.22
ZnCE1 B:His782.92
ZnCG B:His783.17
ZnCA B:His784.82
ZnN B:Asp814.98
ZnCB B:Asp814.27
ZnOD2 B:Asp812.99
ZnOD1 B:Asp811.99
ZnCG B:Asp812.84
ZnCA B:Asp814.77
ZnO B:Lys1343.74
ZnC B:Lys1344.74
ZnO B:Hoh2974.50

interactive model:
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