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Zinc in PDB 2adr: ADR1 Dna-Binding Domain From Saccharomyces Cerevisiae, uc(Nmr), 25 Structures

Zinc Binding Sites:

The binding sites of Zinc atom in the ADR1 Dna-Binding Domain From Saccharomyces Cerevisiae, uc(Nmr), 25 Structures (pdb code 2adr). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the ADR1 Dna-Binding Domain From Saccharomyces Cerevisiae, uc(Nmr), 25 Structures, PDB code: 2adr:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2adr

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Zinc binding site 1 out of 2 in the ADR1 Dna-Binding Domain From Saccharomyces Cerevisiae, uc(Nmr), 25 Structures


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of ADR1 Dna-Binding Domain From Saccharomyces Cerevisiae, uc(Nmr), 25 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn162

b:0.0
occ:1.00
NE2 A:HIS155 2.0 0.0 1.0
NE2 A:HIS150 2.1 0.0 1.0
SG A:CYS137 2.3 0.0 1.0
SG A:CYS134 2.3 0.0 1.0
HB2 A:LEU136 2.7 0.0 1.0
CD2 A:HIS150 2.8 0.0 1.0
H A:CYS137 2.8 0.0 1.0
CD2 A:HIS155 2.8 0.0 1.0
HD2 A:HIS150 2.8 0.0 1.0
HD2 A:HIS155 2.9 0.0 1.0
HB3 A:CYS137 3.0 0.0 1.0
CE1 A:HIS155 3.2 0.0 1.0
CB A:CYS137 3.2 0.0 1.0
CE1 A:HIS150 3.2 0.0 1.0
N A:CYS137 3.4 0.0 1.0
CB A:CYS134 3.5 0.0 1.0
HB3 A:CYS134 3.5 0.0 1.0
HE1 A:HIS155 3.6 0.0 1.0
HE1 A:HIS150 3.6 0.0 1.0
HB2 A:CYS134 3.8 0.0 1.0
CB A:LEU136 3.8 0.0 1.0
HD13 A:LEU136 3.8 0.0 1.0
CA A:CYS137 3.9 0.0 1.0
H A:LEU136 3.9 0.0 1.0
CG A:HIS150 4.0 0.0 1.0
CG A:HIS155 4.0 0.0 1.0
HB2 A:CYS137 4.1 0.0 1.0
HB2 A:ARG139 4.1 0.0 1.0
ND1 A:HIS150 4.2 0.0 1.0
ND1 A:HIS155 4.2 0.0 1.0
C A:LEU136 4.2 0.0 1.0
HB3 A:LEU136 4.4 0.0 1.0
HH11 A:ARG139 4.4 0.0 1.0
HG A:LEU136 4.4 0.0 1.0
CA A:LEU136 4.4 0.0 1.0
H A:ASN138 4.5 0.0 1.0
N A:LEU136 4.5 0.0 1.0
CG A:LEU136 4.5 0.0 1.0
HE2 A:PHE141 4.6 0.0 1.0
CD1 A:LEU136 4.6 0.0 1.0
HA A:CYS137 4.7 0.0 1.0
C A:CYS137 4.8 0.0 1.0
CA A:CYS134 4.8 0.0 1.0
H A:ARG139 4.8 0.0 1.0
HG3 A:ARG139 4.9 0.0 1.0
HA A:ALA151 4.9 0.0 1.0
N A:ASN138 5.0 0.0 1.0
HD11 A:LEU136 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2adr

Go back to Zinc Binding Sites List in 2adr
Zinc binding site 2 out of 2 in the ADR1 Dna-Binding Domain From Saccharomyces Cerevisiae, uc(Nmr), 25 Structures


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of ADR1 Dna-Binding Domain From Saccharomyces Cerevisiae, uc(Nmr), 25 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn163

b:0.0
occ:1.00
NE2 A:HIS122 2.0 0.0 1.0
NE2 A:HIS126 2.1 0.0 1.0
SG A:CYS109 2.4 0.0 1.0
SG A:CYS106 2.4 0.0 1.0
HD3 A:ARG111 2.7 0.0 1.0
CD2 A:HIS126 2.7 0.0 1.0
HD2 A:HIS126 2.8 0.0 1.0
CD2 A:HIS122 2.9 0.0 1.0
HD2 A:ARG111 2.9 0.0 1.0
HD2 A:HIS122 2.9 0.0 1.0
HB3 A:CYS106 3.0 0.0 1.0
CB A:CYS106 3.0 0.0 1.0
HB2 A:CYS106 3.0 0.0 1.0
HG2 A:ARG111 3.1 0.0 1.0
CE1 A:HIS126 3.2 0.0 1.0
CD A:ARG111 3.2 0.0 1.0
CE1 A:HIS122 3.2 0.0 1.0
H A:CYS109 3.3 0.0 1.0
HB A:VAL108 3.4 0.0 1.0
HE1 A:HIS122 3.6 0.0 1.0
CG A:ARG111 3.6 0.0 1.0
HE1 A:HIS126 3.6 0.0 1.0
HG3 A:ARG111 3.9 0.0 1.0
CG A:HIS126 4.0 0.0 1.0
CB A:CYS109 4.1 0.0 1.0
N A:CYS109 4.1 0.0 1.0
CG A:HIS122 4.1 0.0 1.0
ND1 A:HIS126 4.1 0.0 1.0
H A:VAL108 4.2 0.0 1.0
ND1 A:HIS122 4.2 0.0 1.0
HB3 A:CYS109 4.4 0.0 1.0
CB A:VAL108 4.4 0.0 1.0
CA A:CYS106 4.5 0.0 1.0
HG22 A:VAL108 4.5 0.0 1.0
H A:ARG111 4.6 0.0 1.0
NE A:ARG111 4.6 0.0 1.0
CA A:CYS109 4.6 0.0 1.0
HH11 A:ARG111 4.7 0.0 1.0
HE1 A:PHE113 4.7 0.0 1.0
HB2 A:CYS109 4.7 0.0 1.0
HD23 A:LEU119 4.8 0.0 1.0
HA A:CYS106 4.9 0.0 1.0
O A:HIS122 4.9 0.0 1.0
N A:VAL108 4.9 0.0 1.0
C A:VAL108 5.0 0.0 1.0

Reference:

P.M.Bowers, L.E.Schaufler, R.E.Klevit. A Folding Transition and Novel Zinc Finger Accessory Domain in the Transcription Factor ADR1. Nat.Struct.Biol. V. 6 478 1999.
ISSN: ISSN 1072-8368
PubMed: 10331877
DOI: 10.1038/8283
Page generated: Sat Sep 26 00:51:14 2020
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