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Zinc in PDB 1zfo: Amino-Terminal Lim-Domain Peptide of Lasp-1, uc(Nmr)

Zinc Binding Sites:

The binding sites of Zinc atom in the Amino-Terminal Lim-Domain Peptide of Lasp-1, uc(Nmr) (pdb code 1zfo). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Amino-Terminal Lim-Domain Peptide of Lasp-1, uc(Nmr), PDB code: 1zfo:

Zinc binding site 1 out of 1 in 1zfo

Go back to Zinc Binding Sites List in 1zfo
Zinc binding site 1 out of 1 in the Amino-Terminal Lim-Domain Peptide of Lasp-1, uc(Nmr)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Amino-Terminal Lim-Domain Peptide of Lasp-1, uc(Nmr) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn31

b:0.6
occ:1.00
ND1 A:HIS26 2.0 0.5 1.0
SG A:CYS8 2.3 0.5 1.0
SG A:CYS5 2.3 0.5 1.0
SG A:CYS29 2.3 0.5 1.0
HB2 A:CYS5 2.9 0.5 1.0
HB3 A:CYS8 2.9 0.6 1.0
CE1 A:HIS26 2.9 0.5 1.0
HB2 A:HIS26 2.9 0.4 1.0
CB A:CYS5 3.0 0.4 1.0
CG A:HIS26 3.1 0.5 1.0
HB2 A:CYS29 3.1 0.5 1.0
CB A:CYS29 3.1 0.4 1.0
HE1 A:HIS26 3.1 0.6 1.0
H A:CYS8 3.2 0.5 1.0
CB A:CYS8 3.2 0.6 1.0
HB3 A:CYS5 3.2 0.5 1.0
HB3 A:CYS29 3.2 0.5 1.0
CB A:HIS26 3.5 0.4 1.0
H A:HIS26 3.6 0.8 1.0
N A:HIS26 3.7 0.5 1.0
H A:GLY9 3.9 1.0 1.0
N A:CYS8 3.9 0.5 1.0
HB2 A:CYS8 4.0 0.6 1.0
NE2 A:HIS26 4.1 0.5 1.0
CA A:CYS8 4.1 0.6 1.0
H A:LYS10 4.1 0.6 1.0
CD2 A:HIS26 4.2 0.5 1.0
CA A:HIS26 4.2 0.4 1.0
HA A:TRP25 4.3 0.5 1.0
HB3 A:ARG7 4.3 1.3 1.0
HB3 A:HIS26 4.4 0.5 1.0
C A:TRP25 4.4 0.4 1.0
CA A:CYS5 4.5 0.4 1.0
HB2 A:LYS10 4.5 0.9 1.0
HG23 A:VAL12 4.5 1.4 1.0
H A:ARG7 4.6 0.6 1.0
CA A:CYS29 4.6 0.4 1.0
HA A:CYS5 4.8 0.6 1.0
H A:CYS29 4.8 0.4 1.0
N A:GLY9 4.8 0.7 1.0
CA A:TRP25 4.9 0.4 1.0
HB3 A:TRP25 4.9 0.5 1.0
HG3 A:LYS10 4.9 0.9 1.0
HA A:CYS8 4.9 0.7 1.0
HG3 A:ARG7 5.0 2.1 1.0
HE2 A:HIS26 5.0 0.6 1.0

Reference:

A.Hammarstrom, K.D.Berndt, R.Sillard, K.Adermann, G.Otting. Solution Structure of A Naturally-Occurring Zinc-Peptide Complex Demonstrates That the N-Terminal Zinc-Binding Module of the Lasp-1 Lim Domain Is An Independent Folding Unit. Biochemistry V. 35 12723 1996.
ISSN: ISSN 0006-2960
PubMed: 8841116
DOI: 10.1021/BI961149J
Page generated: Wed Aug 20 00:52:56 2025

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