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Zinc in PDB 1ze9: Zinc-Binding Domain of Alzheimer'S Disease Amyloid Beta-Peptide Complexed with A Zinc (II) Cation

Zinc Binding Sites:

The binding sites of Zinc atom in the Zinc-Binding Domain of Alzheimer'S Disease Amyloid Beta-Peptide Complexed with A Zinc (II) Cation (pdb code 1ze9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Zinc-Binding Domain of Alzheimer'S Disease Amyloid Beta-Peptide Complexed with A Zinc (II) Cation, PDB code: 1ze9:

Zinc binding site 1 out of 1 in 1ze9

Go back to Zinc Binding Sites List in 1ze9
Zinc binding site 1 out of 1 in the Zinc-Binding Domain of Alzheimer'S Disease Amyloid Beta-Peptide Complexed with A Zinc (II) Cation


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Zinc-Binding Domain of Alzheimer'S Disease Amyloid Beta-Peptide Complexed with A Zinc (II) Cation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn18

b:1.0
occ:1.00
OE2 A:GLU11 2.1 1.0 1.0
OE1 A:GLU11 2.1 1.0 1.0
ND1 A:HIS6 2.1 1.0 1.0
NE2 A:HIS13 2.1 1.0 1.0
ND1 A:HIS14 2.3 1.0 1.0
CD A:GLU11 2.4 1.0 1.0
HB2 A:HIS14 2.9 1.0 1.0
HB2 A:HIS6 3.0 1.0 1.0
CD2 A:HIS13 3.1 1.0 1.0
CE1 A:HIS6 3.1 1.0 1.0
CE1 A:HIS13 3.1 1.0 1.0
CG A:HIS6 3.1 1.0 1.0
CE1 A:HIS14 3.2 1.0 1.0
HD2 A:HIS13 3.3 1.0 1.0
CG A:HIS14 3.3 1.0 1.0
HE1 A:HIS6 3.3 1.0 1.0
HE1 A:HIS13 3.3 1.0 1.0
HE1 A:HIS14 3.4 1.0 1.0
CB A:HIS6 3.4 1.0 1.0
CB A:HIS14 3.6 1.0 1.0
HB3 A:HIS6 3.6 1.0 1.0
CG A:GLU11 3.9 1.0 1.0
H A:GLU11 4.1 1.0 1.0
ND1 A:HIS13 4.2 1.0 1.0
CG A:HIS13 4.2 1.0 1.0
NE2 A:HIS6 4.2 1.0 1.0
HB2 A:GLU11 4.2 1.0 1.0
CD2 A:HIS6 4.3 1.0 1.0
HB3 A:HIS14 4.3 1.0 1.0
HG2 A:GLU11 4.4 1.0 1.0
HG3 A:GLU11 4.4 1.0 1.0
NE2 A:HIS14 4.4 1.0 1.0
CD2 A:HIS14 4.4 1.0 1.0
HA A:HIS14 4.6 1.0 1.0
CA A:HIS14 4.6 1.0 1.0
CB A:GLU11 4.6 1.0 1.0
HA A:TYR10 4.8 1.0 1.0
O A:GLY9 4.8 1.0 1.0
N A:HIS14 4.8 1.0 1.0
N A:GLU11 4.8 1.0 1.0
H A:HIS14 4.9 1.0 1.0
CA A:HIS6 4.9 1.0 1.0
H A:HIS6 5.0 1.0 1.0

Reference:

S.Zirah, S.A.Kozin, A.K.Mazur, A.Blond, M.Cheminant, I.Segalas-Milazzo, P.Debey, S.Rebuffat. Structural Changes of Region 1-16 of the Alzheimer Disease Amyloid Beta-Peptide Upon Zinc Binding and in Vitro Aging. J.Biol.Chem. V. 281 2151 2006.
ISSN: ISSN 0021-9258
PubMed: 16301322
DOI: 10.1074/JBC.M504454200
Page generated: Wed Dec 16 03:15:32 2020

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