Zinc in PDB 1xwh: uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced
Zinc Binding Sites:
The binding sites of Zinc atom in the uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced
(pdb code 1xwh). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced, PDB code: 1xwh:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 1xwh
Go back to
Zinc Binding Sites List in 1xwh
Zinc binding site 1 out
of 2 in the uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn355
b:0.0
occ:1.00
|
HB
|
A:VAL301
|
2.1
|
0.0
|
1.0
|
H
|
A:CYS302
|
2.4
|
0.0
|
1.0
|
ND1
|
A:HIS319
|
2.5
|
0.0
|
1.0
|
SG
|
A:CYS302
|
2.5
|
0.0
|
1.0
|
SG
|
A:CYS322
|
2.5
|
0.0
|
1.0
|
SG
|
A:CYS299
|
2.5
|
0.0
|
1.0
|
HB2
|
A:HIS319
|
2.9
|
0.0
|
1.0
|
CB
|
A:VAL301
|
3.2
|
0.0
|
1.0
|
N
|
A:CYS302
|
3.2
|
0.0
|
1.0
|
CG
|
A:HIS319
|
3.4
|
0.0
|
1.0
|
CE1
|
A:HIS319
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS322
|
3.5
|
0.0
|
1.0
|
HB2
|
A:CYS322
|
3.5
|
0.0
|
1.0
|
H
|
A:HIS319
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS302
|
3.6
|
0.0
|
1.0
|
HB3
|
A:CYS322
|
3.6
|
0.0
|
1.0
|
HB3
|
A:CYS302
|
3.6
|
0.0
|
1.0
|
HE1
|
A:HIS319
|
3.6
|
0.0
|
1.0
|
CB
|
A:HIS319
|
3.6
|
0.0
|
1.0
|
H
|
A:VAL301
|
3.7
|
0.0
|
1.0
|
HG11
|
A:VAL301
|
3.7
|
0.0
|
1.0
|
HG13
|
A:VAL301
|
3.8
|
0.0
|
1.0
|
CG1
|
A:VAL301
|
3.8
|
0.0
|
1.0
|
HG22
|
A:VAL301
|
3.9
|
0.0
|
1.0
|
CA
|
A:CYS302
|
4.0
|
0.0
|
1.0
|
CB
|
A:CYS299
|
4.0
|
0.0
|
1.0
|
C
|
A:VAL301
|
4.0
|
0.0
|
1.0
|
CG2
|
A:VAL301
|
4.0
|
0.0
|
1.0
|
CA
|
A:VAL301
|
4.0
|
0.0
|
1.0
|
HG21
|
A:VAL301
|
4.0
|
0.0
|
1.0
|
HB3
|
A:CYS299
|
4.1
|
0.0
|
1.0
|
N
|
A:HIS319
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS299
|
4.2
|
0.0
|
1.0
|
N
|
A:VAL301
|
4.2
|
0.0
|
1.0
|
H
|
A:ASP304
|
4.3
|
0.0
|
1.0
|
HB3
|
A:HIS319
|
4.4
|
0.0
|
1.0
|
H
|
A:ARG303
|
4.4
|
0.0
|
1.0
|
HB2
|
A:ASP304
|
4.5
|
0.0
|
1.0
|
HA
|
A:PHE318
|
4.5
|
0.0
|
1.0
|
HB2
|
A:CYS302
|
4.5
|
0.0
|
1.0
|
CA
|
A:HIS319
|
4.5
|
0.0
|
1.0
|
CD2
|
A:HIS319
|
4.6
|
0.0
|
1.0
|
NE2
|
A:HIS319
|
4.6
|
0.0
|
1.0
|
C
|
A:CYS302
|
4.7
|
0.0
|
1.0
|
H
|
A:ALA300
|
4.8
|
0.0
|
1.0
|
HA
|
A:CYS302
|
4.8
|
0.0
|
1.0
|
HG12
|
A:VAL301
|
4.9
|
0.0
|
1.0
|
N
|
A:ARG303
|
4.9
|
0.0
|
1.0
|
CA
|
A:CYS322
|
4.9
|
0.0
|
1.0
|
HA
|
A:VAL301
|
5.0
|
0.0
|
1.0
|
HG23
|
A:VAL301
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 1xwh
Go back to
Zinc Binding Sites List in 1xwh
Zinc binding site 2 out
of 2 in the uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn356
b:0.0
occ:1.00
|
HB2
|
A:CYS314
|
1.9
|
0.0
|
1.0
|
SG
|
A:CYS314
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS311
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS340
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS337
|
2.4
|
0.0
|
1.0
|
CB
|
A:CYS314
|
2.6
|
0.0
|
1.0
|
HB3
|
A:CYS311
|
2.9
|
0.0
|
1.0
|
H
|
A:CYS337
|
3.0
|
0.0
|
1.0
|
CB
|
A:CYS311
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS314
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS311
|
3.4
|
0.0
|
1.0
|
H
|
A:CYS340
|
3.4
|
0.0
|
1.0
|
HB2
|
A:SER339
|
3.5
|
0.0
|
1.0
|
H
|
A:CYS314
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS337
|
3.7
|
0.0
|
1.0
|
HB3
|
A:CYS337
|
3.7
|
0.0
|
1.0
|
CA
|
A:CYS314
|
3.7
|
0.0
|
1.0
|
N
|
A:CYS314
|
3.7
|
0.0
|
1.0
|
N
|
A:CYS337
|
3.8
|
0.0
|
1.0
|
CB
|
A:CYS340
|
3.9
|
0.0
|
1.0
|
HH21
|
A:ARG316
|
3.9
|
0.0
|
1.0
|
HB2
|
A:CYS340
|
3.9
|
0.0
|
1.0
|
N
|
A:CYS340
|
4.1
|
0.0
|
1.0
|
HA
|
A:ARG336
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS337
|
4.3
|
0.0
|
1.0
|
HA
|
A:CYS314
|
4.4
|
0.0
|
1.0
|
CA
|
A:CYS340
|
4.5
|
0.0
|
1.0
|
CB
|
A:SER339
|
4.6
|
0.0
|
1.0
|
HB2
|
A:CYS337
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS311
|
4.6
|
0.0
|
1.0
|
C
|
A:GLY313
|
4.6
|
0.0
|
1.0
|
H
|
A:GLY313
|
4.6
|
0.0
|
1.0
|
HA
|
A:CYS340
|
4.7
|
0.0
|
1.0
|
HB3
|
A:CYS340
|
4.7
|
0.0
|
1.0
|
O
|
A:CYS314
|
4.7
|
0.0
|
1.0
|
C
|
A:CYS314
|
4.7
|
0.0
|
1.0
|
HE
|
A:ARG316
|
4.8
|
0.0
|
1.0
|
HE2
|
A:PHE318
|
4.8
|
0.0
|
1.0
|
C
|
A:CYS337
|
4.9
|
0.0
|
1.0
|
NH2
|
A:ARG316
|
4.9
|
0.0
|
1.0
|
C
|
A:ARG336
|
4.9
|
0.0
|
1.0
|
HB3
|
A:SER339
|
4.9
|
0.0
|
1.0
|
C
|
A:CYS311
|
5.0
|
0.0
|
1.0
|
H
|
A:SER339
|
5.0
|
0.0
|
1.0
|
O
|
A:CYS337
|
5.0
|
0.0
|
1.0
|
N
|
A:GLY313
|
5.0
|
0.0
|
1.0
|
|
Reference:
M.J.Bottomley,
G.Stier,
D.Pennacchini,
G.Legube,
B.Simon,
A.Akhtar,
M.Sattler,
G.Musco.
uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1). Insights Into Autoimmune Polyendocrinopathy-Candidiasis-Ectodermal Dystrophy (Apeced) Disease J.Biol.Chem. V. 280 11505 2005.
ISSN: ISSN 0021-9258
PubMed: 15649886
DOI: 10.1074/JBC.M413959200
Page generated: Wed Oct 16 20:38:52 2024
|