Zinc in PDB 1x4u: Solution Structure of the Fyve Domain From Human Fyve Domain Containing 27 Isoform B Protein

The binding sites of Zinc atom in the Solution Structure of the Fyve Domain From Human Fyve Domain Containing 27 Isoform B Protein (pdb code 1x4u). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Fyve Domain From Human Fyve Domain Containing 27 Isoform B Protein, PDB code: 1x4u:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the Fyve Domain From Human Fyve Domain Containing 27 Isoform B Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Fyve Domain From Human Fyve Domain Containing 27 Isoform B Protein within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 SG A:CYS20 2.3 0.0 1.0 SG A:CYS44 2.3 0.0 1.0 SG A:CYS17 2.3 0.0 1.0 SG A:CYS41 2.4 0.0 1.0 H A:CYS20 2.8 0.0 1.0 HB2 A:CYS44 2.9 0.0 1.0 H A:CYS41 2.9 0.0 1.0 CB A:CYS44 3.3 0.0 1.0 CB A:CYS17 3.3 0.0 1.0 HB3 A:CYS17 3.3 0.0 1.0 HB3 A:CYS41 3.4 0.0 1.0 HB2 A:CYS17 3.4 0.0 1.0 HB3 A:CYS20 3.5 0.0 1.0 CB A:CYS41 3.5 0.0 1.0 CB A:CYS20 3.5 0.0 1.0 N A:CYS20 3.5 0.0 1.0 H A:CYS44 3.8 0.0 1.0 N A:CYS41 3.8 0.0 1.0 HB3 A:CYS44 4.0 0.0 1.0 H A:GLY19 4.0 0.0 1.0 HD1 A:PHE40 4.0 0.0 1.0 HA3 A:GLY19 4.0 0.0 1.0 CA A:CYS20 4.1 0.0 1.0 HB3 A:ALA22 4.1 0.0 1.0 N A:CYS44 4.2 0.0 1.0 CA A:CYS41 4.3 0.0 1.0 HB3 A:PHE40 4.3 0.0 1.0 H A:ALA22 4.3 0.0 1.0 CA A:CYS44 4.3 0.0 1.0 HB2 A:CYS41 4.4 0.0 1.0 HB2 A:ARG43 4.4 0.0 1.0 HB2 A:CYS20 4.4 0.0 1.0 C A:GLY19 4.4 0.0 1.0 HA A:PHE40 4.5 0.0 1.0 H A:SER21 4.5 0.0 1.0 CA A:GLY19 4.5 0.0 1.0 N A:GLY19 4.6 0.0 1.0 H A:ARG43 4.7 0.0 1.0 CA A:CYS17 4.8 0.0 1.0 HA A:CYS44 4.8 0.0 1.0 C A:CYS20 4.8 0.0 1.0 N A:SER21 4.9 0.0 1.0 C A:PHE40 4.9 0.0 1.0 HA A:CYS20 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the Fyve Domain From Human Fyve Domain Containing 27 Isoform B Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Fyve Domain From Human Fyve Domain Containing 27 Isoform B Protein within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 SG A:CYS72 2.3 0.0 1.0 SG A:CYS69 2.3 0.0 1.0 SG A:CYS36 2.3 0.0 1.0 SG A:CYS33 2.3 0.0 1.0 H A:CYS69 2.9 0.0 1.0 H A:CYS36 3.0 0.0 1.0 HB3 A:CYS36 3.0 0.0 1.0 HE2 A:PHE40 3.0 0.0 1.0 HB2 A:CYS72 3.0 0.0 1.0 HB2 A:CYS33 3.1 0.0 1.0 CB A:CYS33 3.2 0.0 1.0 CB A:CYS36 3.3 0.0 1.0 CB A:CYS72 3.3 0.0 1.0 HB3 A:CYS33 3.4 0.0 1.0 HB3 A:CYS69 3.5 0.0 1.0 CB A:CYS69 3.5 0.0 1.0 CE2 A:PHE40 3.7 0.0 1.0 N A:CYS69 3.8 0.0 1.0 HB3 A:ASN35 3.8 0.0 1.0 N A:CYS36 3.8 0.0 1.0 HZ A:PHE40 3.9 0.0 1.0 H A:GLY37 3.9 0.0 1.0 H A:CYS72 3.9 0.0 1.0 HB3 A:CYS72 4.0 0.0 1.0 HB A:VAL68 4.0 0.0 1.0 CZ A:PHE40 4.1 0.0 1.0 HB2 A:CYS36 4.1 0.0 1.0 CA A:CYS36 4.1 0.0 1.0 H A:ASN38 4.1 0.0 1.0 CA A:CYS69 4.2 0.0 1.0 HD21 A:ASN35 4.2 0.0 1.0 O A:CYS69 4.3 0.0 1.0 HB2 A:CYS69 4.4 0.0 1.0 H A:ASN35 4.4 0.0 1.0 N A:CYS72 4.4 0.0 1.0 CA A:CYS72 4.5 0.0 1.0 HB2 A:ASN38 4.5 0.0 1.0 HD21 A:ASN38 4.6 0.0 1.0 N A:GLY37 4.6 0.0 1.0 CD2 A:PHE40 4.6 0.0 1.0 HB2 A:SER71 4.7 0.0 1.0 HA A:VAL68 4.7 0.0 1.0 CA A:CYS33 4.7 0.0 1.0 C A:CYS69 4.7 0.0 1.0 HD2 A:PHE40 4.8 0.0 1.0 ND2 A:ASN38 4.8 0.0 1.0 CB A:ASN35 4.8 0.0 1.0 H A:SER34 4.8 0.0 1.0 C A:CYS36 4.9 0.0 1.0 HA A:CYS33 4.9 0.0 1.0 C A:VAL68 4.9 0.0 1.0 HA A:CYS72 4.9 0.0 1.0 CB A:VAL68 4.9 0.0 1.0 C A:ASN35 5.0 0.0 1.0

T.Tomizawa, T.Kigawa, S.Koshiba, M.Inoue, S.Yokoyama. Solution Structure of the Fyve Domain From Human Fyve Domain Containing 27 Isoform B Protein To Be Published.