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Zinc in PDB 2gtq: Crystal Structure of Aminopeptidase N From Human Pathogen Neisseria Meningitidis

Enzymatic activity of Crystal Structure of Aminopeptidase N From Human Pathogen Neisseria Meningitidis

All present enzymatic activity of Crystal Structure of Aminopeptidase N From Human Pathogen Neisseria Meningitidis:
3.4.11.2;

Protein crystallography data

The structure of Crystal Structure of Aminopeptidase N From Human Pathogen Neisseria Meningitidis, PDB code: 2gtq was solved by B.Nocek, R.Mulligan, M.Bargassa, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.05
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 224.208, 224.208, 57.679, 90.00, 90.00, 120.00
R / Rfree (%) 16.4 / 21.1

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Aminopeptidase N From Human Pathogen Neisseria Meningitidis (pdb code 2gtq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Aminopeptidase N From Human Pathogen Neisseria Meningitidis, PDB code: 2gtq:

Zinc binding site 1 out of 1 in 2gtq

Go back to Zinc Binding Sites List in 2gtq
Zinc binding site 1 out of 1 in the Crystal Structure of Aminopeptidase N From Human Pathogen Neisseria Meningitidis


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Aminopeptidase N From Human Pathogen Neisseria Meningitidis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1001

b:30.3
occ:0.70
OE1 A:GLU316 2.0 25.2 1.0
NE2 A:HIS297 2.1 21.9 1.0
NE2 A:HIS293 2.1 21.1 1.0
O A:HOH1411 2.3 35.6 1.0
CD A:GLU316 2.8 24.0 1.0
CD2 A:HIS293 3.0 18.9 1.0
OE2 A:GLU316 3.0 23.9 1.0
CD2 A:HIS297 3.0 19.6 1.0
CE1 A:HIS297 3.1 18.5 1.0
CE1 A:HIS293 3.2 21.5 1.0
O A:HOH1293 3.8 18.6 1.0
CG A:HIS293 4.2 19.2 1.0
CG A:HIS297 4.2 20.3 1.0
ND1 A:HIS297 4.2 19.6 1.0
CE1 A:TYR377 4.2 27.5 1.0
ND1 A:HIS293 4.2 18.8 1.0
OE1 A:GLU260 4.3 22.7 1.0
CG A:GLU316 4.3 20.4 1.0
OH A:TYR377 4.4 24.6 1.0
OE1 A:GLU294 4.5 22.3 1.0
CZ A:TYR377 4.6 24.8 1.0
CG2 A:THR319 4.7 17.9 1.0
OE2 A:GLU294 4.7 24.3 1.0
CB A:THR319 4.8 19.2 1.0
CA A:GLU316 4.8 19.3 1.0
CB A:GLU316 4.8 19.7 1.0
CD A:GLU260 4.8 21.2 1.0
OE2 A:GLU260 4.9 18.1 1.0
CD A:GLU294 5.0 22.9 1.0

Reference:

B.Nocek, R.Mulligan, M.Bargassa, F.Collart, A.Joachimiak. Crystal Structure of Aminopeptidase N From Human Pathogen Neisseria Meningitidis. Proteins V. 70 273 2007.
ISSN: ISSN 0887-3585
PubMed: 17876832
DOI: 10.1002/PROT.21276
Page generated: Thu Oct 17 00:24:13 2024

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