Zinc in PDB 1x4j: Solution Structure of Ring Finger in Ring Finger Protein 38
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of Ring Finger in Ring Finger Protein 38
(pdb code 1x4j). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of Ring Finger in Ring Finger Protein 38, PDB code: 1x4j:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 1x4j
Go back to
Zinc Binding Sites List in 1x4j
Zinc binding site 1 out
of 2 in the Solution Structure of Ring Finger in Ring Finger Protein 38
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of Ring Finger in Ring Finger Protein 38 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn201
b:0.0
occ:1.00
|
ND1
|
A:HIS49
|
2.1
|
0.0
|
1.0
|
SG
|
A:CYS29
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS52
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS26
|
2.4
|
0.0
|
1.0
|
HB2
|
A:HIS49
|
2.6
|
0.0
|
1.0
|
CG
|
A:HIS49
|
3.0
|
0.0
|
1.0
|
CE1
|
A:HIS49
|
3.1
|
0.0
|
1.0
|
H
|
A:CYS29
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS26
|
3.1
|
0.0
|
1.0
|
CB
|
A:CYS26
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS29
|
3.2
|
0.0
|
1.0
|
CB
|
A:HIS49
|
3.3
|
0.0
|
1.0
|
HE1
|
A:HIS49
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS26
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS29
|
3.4
|
0.0
|
1.0
|
HB
|
A:VAL28
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS52
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS52
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS52
|
3.8
|
0.0
|
1.0
|
HB3
|
A:HIS49
|
3.8
|
0.0
|
1.0
|
N
|
A:CYS29
|
3.9
|
0.0
|
1.0
|
H
|
A:HIS49
|
4.0
|
0.0
|
1.0
|
CD2
|
A:HIS49
|
4.1
|
0.0
|
1.0
|
NE2
|
A:HIS49
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS29
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS29
|
4.2
|
0.0
|
1.0
|
HB3
|
A:CYS31
|
4.3
|
0.0
|
1.0
|
HE1
|
A:PHE33
|
4.3
|
0.0
|
1.0
|
CB
|
A:VAL28
|
4.5
|
0.0
|
1.0
|
N
|
A:HIS49
|
4.5
|
0.0
|
1.0
|
CA
|
A:HIS49
|
4.5
|
0.0
|
1.0
|
H
|
A:CYS31
|
4.5
|
0.0
|
1.0
|
H
|
A:CYS52
|
4.5
|
0.0
|
1.0
|
HG11
|
A:VAL28
|
4.6
|
0.0
|
1.0
|
O
|
A:CYS31
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS26
|
4.7
|
0.0
|
1.0
|
HG22
|
A:VAL28
|
4.8
|
0.0
|
1.0
|
HG3
|
A:LYS51
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS52
|
4.9
|
0.0
|
1.0
|
H
|
A:VAL28
|
4.9
|
0.0
|
1.0
|
C
|
A:CYS29
|
4.9
|
0.0
|
1.0
|
HD1
|
A:PHE33
|
4.9
|
0.0
|
1.0
|
C
|
A:VAL28
|
4.9
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 1x4j
Go back to
Zinc Binding Sites List in 1x4j
Zinc binding site 2 out
of 2 in the Solution Structure of Ring Finger in Ring Finger Protein 38
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of Ring Finger in Ring Finger Protein 38 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn401
b:0.0
occ:1.00
|
ND1
|
A:HIS46
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS66
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS63
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS44
|
2.4
|
0.0
|
1.0
|
CE1
|
A:HIS46
|
2.6
|
0.0
|
1.0
|
HE1
|
A:HIS46
|
2.6
|
0.0
|
1.0
|
H
|
A:CYS66
|
2.8
|
0.0
|
1.0
|
HB2
|
A:CYS44
|
3.0
|
0.0
|
1.0
|
HB
|
A:ILE65
|
3.0
|
0.0
|
1.0
|
CG
|
A:HIS46
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS44
|
3.3
|
0.0
|
1.0
|
HD11
|
A:LEU42
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS63
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS63
|
3.4
|
0.0
|
1.0
|
HB2
|
A:HIS46
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS63
|
3.5
|
0.0
|
1.0
|
HB3
|
A:ALA68
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS66
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS66
|
3.6
|
0.0
|
1.0
|
N
|
A:CYS66
|
3.7
|
0.0
|
1.0
|
HB3
|
A:CYS44
|
3.8
|
0.0
|
1.0
|
NE2
|
A:HIS46
|
3.9
|
0.0
|
1.0
|
CB
|
A:HIS46
|
3.9
|
0.0
|
1.0
|
H
|
A:ALA68
|
4.1
|
0.0
|
1.0
|
HZ
|
A:PHE48
|
4.1
|
0.0
|
1.0
|
HD12
|
A:ILE65
|
4.1
|
0.0
|
1.0
|
CB
|
A:ILE65
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS66
|
4.1
|
0.0
|
1.0
|
CD2
|
A:HIS46
|
4.2
|
0.0
|
1.0
|
HB3
|
A:HIS46
|
4.3
|
0.0
|
1.0
|
HE2
|
A:PHE48
|
4.4
|
0.0
|
1.0
|
H
|
A:ILE65
|
4.4
|
0.0
|
1.0
|
CD1
|
A:LEU42
|
4.4
|
0.0
|
1.0
|
HB2
|
A:CYS66
|
4.4
|
0.0
|
1.0
|
HB2
|
A:LEU42
|
4.4
|
0.0
|
1.0
|
O
|
A:CYS44
|
4.4
|
0.0
|
1.0
|
CB
|
A:ALA68
|
4.5
|
0.0
|
1.0
|
HB2
|
A:ALA68
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS44
|
4.5
|
0.0
|
1.0
|
HD13
|
A:LEU42
|
4.6
|
0.0
|
1.0
|
HB3
|
A:LEU42
|
4.6
|
0.0
|
1.0
|
HG21
|
A:ILE65
|
4.6
|
0.0
|
1.0
|
HE2
|
A:HIS46
|
4.7
|
0.0
|
1.0
|
C
|
A:CYS44
|
4.7
|
0.0
|
1.0
|
HG22
|
A:ILE65
|
4.7
|
0.0
|
1.0
|
C
|
A:ILE65
|
4.7
|
0.0
|
1.0
|
C
|
A:CYS66
|
4.7
|
0.0
|
1.0
|
CG2
|
A:ILE65
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS63
|
4.8
|
0.0
|
1.0
|
HG13
|
A:ILE65
|
4.8
|
0.0
|
1.0
|
H
|
A:CYS44
|
4.8
|
0.0
|
1.0
|
CA
|
A:ILE65
|
4.9
|
0.0
|
1.0
|
HD12
|
A:LEU42
|
4.9
|
0.0
|
1.0
|
CG1
|
A:ILE65
|
4.9
|
0.0
|
1.0
|
N
|
A:ALA68
|
5.0
|
0.0
|
1.0
|
CB
|
A:LEU42
|
5.0
|
0.0
|
1.0
|
CZ
|
A:PHE48
|
5.0
|
0.0
|
1.0
|
CD1
|
A:ILE65
|
5.0
|
0.0
|
1.0
|
|
Reference:
F.He,
Y.Muto,
M.Inoue,
T.Kigawa,
M.Shirouzu,
T.Terada,
S.Yokoyama.
Solution Structure of Ring Finger in Ring Finger Protein 38 To Be Published.
Page generated: Wed Oct 16 20:15:18 2024
|