Zinc in PDB 1wjv: Solution Structure of the N-Terminal Zinc Finger Domain of Mouse Cell Growth Regulating Nucleolar Protein Lyar

The binding sites of Zinc atom in the Solution Structure of the N-Terminal Zinc Finger Domain of Mouse Cell Growth Regulating Nucleolar Protein Lyar (pdb code 1wjv). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the N-Terminal Zinc Finger Domain of Mouse Cell Growth Regulating Nucleolar Protein Lyar, PDB code: 1wjv:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the N-Terminal Zinc Finger Domain of Mouse Cell Growth Regulating Nucleolar Protein Lyar


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the N-Terminal Zinc Finger Domain of Mouse Cell Growth Regulating Nucleolar Protein Lyar within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 SG A:CYS16 2.3 0.0 1.0 SG A:CYS32 2.3 0.0 1.0 SG A:CYS13 2.3 0.0 1.0 NE2 A:HIS28 2.3 0.0 1.0 HB3 A:ALA15 2.9 0.0 1.0 H A:CYS16 3.0 0.0 1.0 CE1 A:HIS28 3.1 0.0 1.0 HB2 A:CYS32 3.2 0.0 1.0 HE1 A:HIS28 3.2 0.0 1.0 CB A:CYS32 3.3 0.0 1.0 HB3 A:CYS13 3.4 0.0 1.0 HB3 A:CYS16 3.4 0.0 1.0 HB3 A:CYS32 3.4 0.0 1.0 CB A:CYS13 3.5 0.0 1.0 CD2 A:HIS28 3.5 0.0 1.0 CB A:CYS16 3.5 0.0 1.0 N A:CYS16 3.6 0.0 1.0 H A:GLY17 3.7 0.0 1.0 HB2 A:CYS13 3.8 0.0 1.0 HD2 A:HIS28 3.8 0.0 1.0 CB A:ALA15 3.8 0.0 1.0 HB2 A:ALA15 3.9 0.0 1.0 H A:ALA15 4.1 0.0 1.0 CA A:CYS16 4.1 0.0 1.0 HB2 A:GLU18 4.2 0.0 1.0 ND1 A:HIS28 4.3 0.0 1.0 HB2 A:CYS16 4.4 0.0 1.0 OD1 A:ASN34 4.4 0.0 1.0 C A:ALA15 4.4 0.0 1.0 CG A:HIS28 4.5 0.0 1.0 CA A:ALA15 4.5 0.0 1.0 HB2 A:CYS35 4.5 0.0 1.0 N A:GLY17 4.6 0.0 1.0 HB1 A:ALA15 4.6 0.0 1.0 CA A:CYS32 4.7 0.0 1.0 H A:GLU18 4.7 0.0 1.0 N A:ALA15 4.7 0.0 1.0 CA A:CYS13 4.8 0.0 1.0 HG22 A:VAL20 4.8 0.0 1.0 HG3 A:GLU18 4.8 0.0 1.0 HA A:CYS32 4.9 0.0 1.0 C A:CYS16 4.9 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the N-Terminal Zinc Finger Domain of Mouse Cell Growth Regulating Nucleolar Protein Lyar


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the N-Terminal Zinc Finger Domain of Mouse Cell Growth Regulating Nucleolar Protein Lyar within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 SG A:CYS58 2.3 0.0 1.0 SG A:CYS43 2.3 0.0 1.0 SG A:CYS40 2.3 0.0 1.0 NE2 A:HIS55 2.3 0.0 1.0 HB3 A:ASP42 2.9 0.0 1.0 H A:CYS43 3.1 0.0 1.0 CE1 A:HIS55 3.2 0.0 1.0 HB3 A:CYS40 3.2 0.0 1.0 HE1 A:HIS55 3.3 0.0 1.0 HB3 A:CYS58 3.3 0.0 1.0 CB A:CYS40 3.4 0.0 1.0 HB3 A:CYS43 3.4 0.0 1.0 CD2 A:HIS55 3.4 0.0 1.0 CB A:CYS58 3.4 0.0 1.0 CB A:CYS43 3.5 0.0 1.0 HG12 A:VAL9 3.6 0.0 1.0 HD2 A:HIS55 3.7 0.0 1.0 N A:CYS43 3.7 0.0 1.0 HB2 A:CYS40 3.7 0.0 1.0 H A:GLY44 3.9 0.0 1.0 HA A:CYS58 3.9 0.0 1.0 CB A:ASP42 4.0 0.0 1.0 HG13 A:VAL9 4.2 0.0 1.0 CA A:CYS43 4.2 0.0 1.0 CA A:CYS58 4.2 0.0 1.0 HB2 A:ASP42 4.2 0.0 1.0 HG21 A:VAL9 4.3 0.0 1.0 HB2 A:CYS58 4.3 0.0 1.0 ND1 A:HIS55 4.3 0.0 1.0 HB2 A:CYS43 4.4 0.0 1.0 HE2 A:PHE47 4.4 0.0 1.0 CG1 A:VAL9 4.4 0.0 1.0 OE1 A:GLU61 4.4 0.0 1.0 O A:LYS57 4.5 0.0 1.0 CG A:HIS55 4.5 0.0 1.0 C A:ASP42 4.5 0.0 1.0 OD2 A:ASP42 4.6 0.0 1.0 CA A:ASP42 4.7 0.0 1.0 H A:ASP42 4.7 0.0 1.0 CA A:CYS40 4.7 0.0 1.0 N A:CYS58 4.7 0.0 1.0 N A:GLY44 4.8 0.0 1.0 C A:LYS57 4.8 0.0 1.0 CG A:ASP42 4.8 0.0 1.0 HZ A:PHE47 4.8 0.0 1.0 O A:CYS40 4.9 0.0 1.0 N A:ASP42 4.9 0.0 1.0 C A:CYS40 4.9 0.0 1.0

M.Yoneyama, N.Tochio, S.Koshiba, M.Inoue, T.Kigawa, Y.Muto, S.Yokoyama. Solution Structure of the N-Terminal Zinc Finger Domain of Mouse Cell Growth Regulating Nucleolar Protein Lyar To Be Published.