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Zinc in PDB 1wfe: Solution Structure of the 2ND Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the 2ND Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein (pdb code 1wfe). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the 2ND Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein, PDB code: 1wfe:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1wfe

Go back to Zinc Binding Sites List in 1wfe
Zinc binding site 1 out of 2 in the Solution Structure of the 2ND Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the 2ND Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
SG A:CYS51 2.3 0.0 1.0
ND1 A:HIS54 2.4 0.0 1.0
SG A:CYS33 2.4 0.0 1.0
SG A:CYS28 2.4 0.0 1.0
HB2 A:HIS54 2.6 0.0 1.0
CG A:HIS54 3.1 0.0 1.0
HB2 A:CYS28 3.1 0.0 1.0
CB A:CYS28 3.2 0.0 1.0
HB2 A:CYS33 3.3 0.0 1.0
CB A:CYS33 3.3 0.0 1.0
CE1 A:HIS54 3.3 0.0 1.0
H A:CYS51 3.3 0.0 1.0
CB A:HIS54 3.3 0.0 1.0
HB3 A:CYS51 3.4 0.0 1.0
HB3 A:CYS33 3.4 0.0 1.0
HB3 A:PHE30 3.4 0.0 1.0
HB3 A:CYS28 3.5 0.0 1.0
CB A:CYS51 3.5 0.0 1.0
HE1 A:HIS54 3.6 0.0 1.0
H A:HIS54 3.9 0.0 1.0
HB2 A:ASP35 4.0 0.0 1.0
HB3 A:HIS54 4.0 0.0 1.0
N A:CYS51 4.1 0.0 1.0
CD2 A:HIS54 4.2 0.0 1.0
NE2 A:HIS54 4.2 0.0 1.0
HB2 A:ARG53 4.2 0.0 1.0
HB2 A:PHE30 4.3 0.0 1.0
HD2 A:PHE30 4.3 0.0 1.0
CB A:PHE30 4.3 0.0 1.0
HB2 A:CYS51 4.3 0.0 1.0
N A:HIS54 4.3 0.0 1.0
CA A:CYS51 4.4 0.0 1.0
CA A:HIS54 4.4 0.0 1.0
HB3 A:PHE50 4.5 0.0 1.0
H A:ASP35 4.5 0.0 1.0
CA A:CYS28 4.7 0.0 1.0
H A:PHE30 4.7 0.0 1.0
CA A:CYS33 4.7 0.0 1.0
CD2 A:PHE30 4.8 0.0 1.0
O A:CYS51 4.8 0.0 1.0
CG A:PHE30 4.9 0.0 1.0
HA A:CYS28 4.9 0.0 1.0
C A:CYS51 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 1wfe

Go back to Zinc Binding Sites List in 1wfe
Zinc binding site 2 out of 2 in the Solution Structure of the 2ND Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the 2ND Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
NE2 A:HIS60 2.3 0.0 1.0
SG A:CYS62 2.3 0.0 1.0
SG A:CYS46 2.3 0.0 1.0
SG A:CYS43 2.4 0.0 1.0
H A:CYS46 2.8 0.0 1.0
HE1 A:HIS60 2.9 0.0 1.0
CE1 A:HIS60 2.9 0.0 1.0
HB2 A:TYR45 3.0 0.0 1.0
HB3 A:CYS43 3.2 0.0 1.0
HB2 A:CYS62 3.2 0.0 1.0
CB A:CYS43 3.2 0.0 1.0
HG2 A:GLN57 3.3 0.0 1.0
HB3 A:CYS46 3.3 0.0 1.0
CB A:CYS62 3.3 0.0 1.0
HA A:CYS62 3.3 0.0 1.0
HB2 A:CYS43 3.4 0.0 1.0
CB A:CYS46 3.4 0.0 1.0
HA A:GLN57 3.5 0.0 1.0
CD2 A:HIS60 3.5 0.0 1.0
N A:CYS46 3.7 0.0 1.0
CA A:CYS62 3.9 0.0 1.0
HD2 A:HIS60 3.9 0.0 1.0
HE1 A:PHE50 3.9 0.0 1.0
CB A:TYR45 4.0 0.0 1.0
ND1 A:HIS60 4.1 0.0 1.0
CA A:CYS46 4.2 0.0 1.0
H A:TYR45 4.2 0.0 1.0
HB3 A:CYS62 4.3 0.0 1.0
HZ A:PHE50 4.3 0.0 1.0
HB2 A:CYS46 4.3 0.0 1.0
CG A:GLN57 4.3 0.0 1.0
HB3 A:TYR45 4.4 0.0 1.0
CE1 A:PHE50 4.4 0.0 1.0
CG A:HIS60 4.4 0.0 1.0
HE21 A:GLN57 4.5 0.0 1.0
H A:GLU63 4.5 0.0 1.0
CA A:GLN57 4.5 0.0 1.0
HD1 A:TYR45 4.5 0.0 1.0
CZ A:PHE50 4.6 0.0 1.0
HB3 A:GLN57 4.6 0.0 1.0
C A:TYR45 4.7 0.0 1.0
CA A:CYS43 4.7 0.0 1.0
H A:GLU47 4.7 0.0 1.0
CB A:GLN57 4.7 0.0 1.0
H A:LYS64 4.7 0.0 1.0
CA A:TYR45 4.8 0.0 1.0
HG3 A:GLN57 4.8 0.0 1.0
HB2 A:LYS64 4.8 0.0 1.0
N A:CYS62 4.9 0.0 1.0
CG A:TYR45 4.9 0.0 1.0
HB2 A:LYS48 4.9 0.0 1.0
N A:TYR45 4.9 0.0 1.0
C A:CYS62 4.9 0.0 1.0
HD1 A:HIS60 4.9 0.0 1.0
H A:CYS62 4.9 0.0 1.0
HA A:CYS46 5.0 0.0 1.0
HG2 A:LYS64 5.0 0.0 1.0
O A:GLN57 5.0 0.0 1.0
H A:LYS48 5.0 0.0 1.0

Reference:

T.Tomizawa, T.Kigawa, K.Saito, S.Koshiba, M.Inoue, S.Yokoyama. Solution Structure of the 2ND Zf-AN1 Domain of Mouse Riken Cdna 2310008M20 Protein To Be Published.
Page generated: Wed Oct 16 20:02:01 2024

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