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Zinc in PDB 1wew: Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074 (pdb code 1wew). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074, PDB code: 1wew:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1wew

Go back to Zinc Binding Sites List in 1wew
Zinc binding site 1 out of 2 in the Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
SG A:CYS21 2.3 0.0 1.0
SG A:CYS46 2.3 0.0 1.0
SG A:CYS19 2.4 0.0 1.0
ND1 A:HIS43 2.4 0.0 1.0
HB2 A:HIS43 2.6 0.0 1.0
HB3 A:CYS19 3.0 0.0 1.0
HB3 A:CYS21 3.1 0.0 1.0
CG A:HIS43 3.2 0.0 1.0
CB A:CYS19 3.2 0.0 1.0
HB3 A:CYS46 3.3 0.0 1.0
CB A:CYS46 3.3 0.0 1.0
CB A:CYS21 3.3 0.0 1.0
CB A:HIS43 3.4 0.0 1.0
HB2 A:CYS46 3.4 0.0 1.0
CE1 A:HIS43 3.4 0.0 1.0
HB2 A:CYS19 3.6 0.0 1.0
H A:CYS21 3.6 0.0 1.0
HE1 A:HIS43 3.7 0.0 1.0
H A:HIS43 3.8 0.0 1.0
HB3 A:HIS43 4.0 0.0 1.0
HB2 A:CYS21 4.0 0.0 1.0
N A:CYS21 4.3 0.0 1.0
HB3 A:ASN23 4.3 0.0 1.0
CA A:CYS21 4.4 0.0 1.0
CD2 A:HIS43 4.4 0.0 1.0
N A:HIS43 4.4 0.0 1.0
NE2 A:HIS43 4.5 0.0 1.0
H A:VAL20 4.5 0.0 1.0
CA A:HIS43 4.5 0.0 1.0
CA A:CYS19 4.6 0.0 1.0
H A:GLY22 4.7 0.0 1.0
H A:ASN23 4.7 0.0 1.0
CA A:CYS46 4.7 0.0 1.0
HG22 A:VAL20 4.7 0.0 1.0
N A:VAL20 4.9 0.0 1.0
HA A:CYS46 4.9 0.0 1.0
HA A:CYS19 5.0 0.0 1.0
HB2 A:ASN23 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 1wew

Go back to Zinc Binding Sites List in 1wew
Zinc binding site 2 out of 2 in the Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
SG A:CYS66 2.3 0.0 1.0
SG A:CYS33 2.3 0.0 1.0
SG A:CYS69 2.4 0.0 1.0
SG A:CYS38 2.4 0.0 1.0
HB2 A:CYS69 2.9 0.0 1.0
H A:CYS66 3.1 0.0 1.0
HB3 A:CYS38 3.2 0.0 1.0
CB A:CYS38 3.2 0.0 1.0
CB A:CYS69 3.2 0.0 1.0
HB2 A:CYS38 3.3 0.0 1.0
HB3 A:CYS66 3.4 0.0 1.0
HB2 A:CYS33 3.4 0.0 1.0
CB A:CYS33 3.4 0.0 1.0
H A:CYS69 3.5 0.0 1.0
CB A:CYS66 3.5 0.0 1.0
HG21 A:VAL40 3.5 0.0 1.0
HB3 A:CYS33 3.6 0.0 1.0
HB A:ILE68 3.7 0.0 1.0
HD1 A:TYR65 3.8 0.0 1.0
HG22 A:VAL40 3.8 0.0 1.0
N A:CYS66 3.9 0.0 1.0
HB3 A:ASP35 3.9 0.0 1.0
N A:CYS69 3.9 0.0 1.0
HB3 A:CYS69 4.1 0.0 1.0
HB2 A:ASP35 4.1 0.0 1.0
CG2 A:VAL40 4.2 0.0 1.0
CA A:CYS69 4.2 0.0 1.0
CA A:CYS66 4.2 0.0 1.0
HB2 A:CYS66 4.4 0.0 1.0
HA A:TYR65 4.5 0.0 1.0
CB A:ASP35 4.6 0.0 1.0
HA A:CYS69 4.6 0.0 1.0
H A:ILE68 4.7 0.0 1.0
H A:VAL40 4.7 0.0 1.0
HG23 A:VAL40 4.7 0.0 1.0
CA A:CYS38 4.7 0.0 1.0
CB A:ILE68 4.8 0.0 1.0
HD12 A:ILE68 4.8 0.0 1.0
C A:ILE68 4.8 0.0 1.0
H A:ASP35 4.8 0.0 1.0
C A:CYS66 4.8 0.0 1.0
CA A:CYS33 4.9 0.0 1.0
CD1 A:TYR65 4.9 0.0 1.0
HG11 A:VAL40 4.9 0.0 1.0
C A:TYR65 4.9 0.0 1.0
HB3 A:TYR65 4.9 0.0 1.0
HA A:CYS38 5.0 0.0 1.0

Reference:

F.He, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyama. Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074 To Be Published.
Page generated: Wed Dec 16 03:09:13 2020

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