Zinc in PDB 1wew: Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074
(pdb code 1wew). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074, PDB code: 1wew:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 1wew
Go back to
Zinc Binding Sites List in 1wew
Zinc binding site 1 out
of 2 in the Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn201
b:0.0
occ:1.00
|
SG
|
A:CYS21
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS46
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS19
|
2.4
|
0.0
|
1.0
|
ND1
|
A:HIS43
|
2.4
|
0.0
|
1.0
|
HB2
|
A:HIS43
|
2.6
|
0.0
|
1.0
|
HB3
|
A:CYS19
|
3.0
|
0.0
|
1.0
|
HB3
|
A:CYS21
|
3.1
|
0.0
|
1.0
|
CG
|
A:HIS43
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS19
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS46
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS46
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS21
|
3.3
|
0.0
|
1.0
|
CB
|
A:HIS43
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS46
|
3.4
|
0.0
|
1.0
|
CE1
|
A:HIS43
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS19
|
3.6
|
0.0
|
1.0
|
H
|
A:CYS21
|
3.6
|
0.0
|
1.0
|
HE1
|
A:HIS43
|
3.7
|
0.0
|
1.0
|
H
|
A:HIS43
|
3.8
|
0.0
|
1.0
|
HB3
|
A:HIS43
|
4.0
|
0.0
|
1.0
|
HB2
|
A:CYS21
|
4.0
|
0.0
|
1.0
|
N
|
A:CYS21
|
4.3
|
0.0
|
1.0
|
HB3
|
A:ASN23
|
4.3
|
0.0
|
1.0
|
CA
|
A:CYS21
|
4.4
|
0.0
|
1.0
|
CD2
|
A:HIS43
|
4.4
|
0.0
|
1.0
|
N
|
A:HIS43
|
4.4
|
0.0
|
1.0
|
NE2
|
A:HIS43
|
4.5
|
0.0
|
1.0
|
H
|
A:VAL20
|
4.5
|
0.0
|
1.0
|
CA
|
A:HIS43
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS19
|
4.6
|
0.0
|
1.0
|
H
|
A:GLY22
|
4.7
|
0.0
|
1.0
|
H
|
A:ASN23
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS46
|
4.7
|
0.0
|
1.0
|
HG22
|
A:VAL20
|
4.7
|
0.0
|
1.0
|
N
|
A:VAL20
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS46
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS19
|
5.0
|
0.0
|
1.0
|
HB2
|
A:ASN23
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 1wew
Go back to
Zinc Binding Sites List in 1wew
Zinc binding site 2 out
of 2 in the Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn401
b:0.0
occ:1.00
|
SG
|
A:CYS66
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS33
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS69
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS38
|
2.4
|
0.0
|
1.0
|
HB2
|
A:CYS69
|
2.9
|
0.0
|
1.0
|
H
|
A:CYS66
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS38
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS38
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS69
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS38
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS66
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS33
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS33
|
3.4
|
0.0
|
1.0
|
H
|
A:CYS69
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS66
|
3.5
|
0.0
|
1.0
|
HG21
|
A:VAL40
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS33
|
3.6
|
0.0
|
1.0
|
HB
|
A:ILE68
|
3.7
|
0.0
|
1.0
|
HD1
|
A:TYR65
|
3.8
|
0.0
|
1.0
|
HG22
|
A:VAL40
|
3.8
|
0.0
|
1.0
|
N
|
A:CYS66
|
3.9
|
0.0
|
1.0
|
HB3
|
A:ASP35
|
3.9
|
0.0
|
1.0
|
N
|
A:CYS69
|
3.9
|
0.0
|
1.0
|
HB3
|
A:CYS69
|
4.1
|
0.0
|
1.0
|
HB2
|
A:ASP35
|
4.1
|
0.0
|
1.0
|
CG2
|
A:VAL40
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS69
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS66
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS66
|
4.4
|
0.0
|
1.0
|
HA
|
A:TYR65
|
4.5
|
0.0
|
1.0
|
CB
|
A:ASP35
|
4.6
|
0.0
|
1.0
|
HA
|
A:CYS69
|
4.6
|
0.0
|
1.0
|
H
|
A:ILE68
|
4.7
|
0.0
|
1.0
|
H
|
A:VAL40
|
4.7
|
0.0
|
1.0
|
HG23
|
A:VAL40
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS38
|
4.7
|
0.0
|
1.0
|
CB
|
A:ILE68
|
4.8
|
0.0
|
1.0
|
HD12
|
A:ILE68
|
4.8
|
0.0
|
1.0
|
C
|
A:ILE68
|
4.8
|
0.0
|
1.0
|
H
|
A:ASP35
|
4.8
|
0.0
|
1.0
|
C
|
A:CYS66
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS33
|
4.9
|
0.0
|
1.0
|
CD1
|
A:TYR65
|
4.9
|
0.0
|
1.0
|
HG11
|
A:VAL40
|
4.9
|
0.0
|
1.0
|
C
|
A:TYR65
|
4.9
|
0.0
|
1.0
|
HB3
|
A:TYR65
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS38
|
5.0
|
0.0
|
1.0
|
|
Reference:
F.He,
Y.Muto,
M.Inoue,
T.Kigawa,
M.Shirouzu,
T.Terada,
S.Yokoyama.
Solution Structure of Phd Domain in Dna-Binding Family Protein AAM98074 To Be Published.
Page generated: Wed Oct 16 20:01:37 2024
|