Zinc in PDB 1wep: Solution Structure of Phd Domain in PHF8

The binding sites of Zinc atom in the Solution Structure of Phd Domain in PHF8 (pdb code 1wep). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of Phd Domain in PHF8, PDB code: 1wep:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of Phd Domain in PHF8


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Phd Domain in PHF8 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 SG A:CYS17 2.3 0.0 1.0 SG A:CYS41 2.3 0.0 1.0 SG A:CYS15 2.3 0.0 1.0 ND1 A:HIS38 2.3 0.0 1.0 HB2 A:HIS38 2.8 0.0 1.0 HB2 A:CYS41 3.1 0.0 1.0 CB A:CYS41 3.2 0.0 1.0 CE1 A:HIS38 3.3 0.0 1.0 CG A:HIS38 3.3 0.0 1.0 HB3 A:CYS15 3.3 0.0 1.0 H A:CYS17 3.4 0.0 1.0 HB3 A:CYS17 3.4 0.0 1.0 CB A:CYS15 3.4 0.0 1.0 HE1 A:HIS38 3.5 0.0 1.0 HB3 A:CYS41 3.5 0.0 1.0 CB A:CYS17 3.5 0.0 1.0 CB A:HIS38 3.6 0.0 1.0 H A:HIS38 3.6 0.0 1.0 HB2 A:CYS15 3.8 0.0 1.0 HB2 A:GLN19 4.1 0.0 1.0 H A:LEU16 4.1 0.0 1.0 N A:CYS17 4.2 0.0 1.0 HB3 A:HIS38 4.2 0.0 1.0 HB2 A:CYS17 4.3 0.0 1.0 N A:HIS38 4.4 0.0 1.0 NE2 A:HIS38 4.4 0.0 1.0 CD2 A:HIS38 4.4 0.0 1.0 CA A:CYS17 4.5 0.0 1.0 CA A:HIS38 4.6 0.0 1.0 H A:CYS41 4.7 0.0 1.0 CA A:CYS41 4.7 0.0 1.0 N A:LEU16 4.7 0.0 1.0 CA A:CYS15 4.8 0.0 1.0 HG2 A:GLN19 4.8 0.0 1.0 HE2 A:MET27 4.9 0.0 1.0 HG3 A:GLN19 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of Phd Domain in PHF8


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of Phd Domain in PHF8 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 SG A:CYS60 2.3 0.0 1.0 SG A:CYS30 2.3 0.0 1.0 SG A:CYS57 2.3 0.0 1.0 SG A:CYS33 2.3 0.0 1.0 HB3 A:CYS57 3.0 0.0 1.0 H A:CYS33 3.0 0.0 1.0 HB2 A:LEU32 3.1 0.0 1.0 HB3 A:CYS33 3.2 0.0 1.0 CB A:CYS57 3.3 0.0 1.0 HB2 A:CYS60 3.3 0.0 1.0 CB A:CYS33 3.4 0.0 1.0 H A:CYS57 3.4 0.0 1.0 CB A:CYS30 3.4 0.0 1.0 HB3 A:CYS30 3.4 0.0 1.0 HB2 A:CYS30 3.5 0.0 1.0 CB A:CYS60 3.5 0.0 1.0 N A:CYS33 3.7 0.0 1.0 H A:CYS60 4.0 0.0 1.0 HB2 A:CYS57 4.1 0.0 1.0 N A:CYS57 4.1 0.0 1.0 HD11 A:LEU32 4.1 0.0 1.0 HB2 A:ASP35 4.1 0.0 1.0 CB A:LEU32 4.1 0.0 1.0 CA A:CYS33 4.1 0.0 1.0 HE1 A:PHE37 4.2 0.0 1.0 HB3 A:CYS60 4.2 0.0 1.0 HB2 A:CYS33 4.2 0.0 1.0 H A:LEU32 4.2 0.0 1.0 HB3 A:ASP59 4.3 0.0 1.0 CA A:CYS57 4.3 0.0 1.0 N A:CYS60 4.4 0.0 1.0 HB3 A:LEU32 4.5 0.0 1.0 C A:LEU32 4.6 0.0 1.0 CA A:CYS60 4.6 0.0 1.0 H A:ASP35 4.6 0.0 1.0 H A:GLN34 4.6 0.0 1.0 H A:ASP59 4.7 0.0 1.0 CA A:LEU32 4.8 0.0 1.0 HA A:HIS56 4.8 0.0 1.0 CA A:CYS30 4.8 0.0 1.0 HZ A:PHE37 4.9 0.0 1.0 N A:LEU32 4.9 0.0 1.0 CD1 A:LEU32 4.9 0.0 1.0 C A:CYS57 4.9 0.0 1.0 O A:CYS57 4.9 0.0 1.0 C A:CYS33 5.0 0.0 1.0 HA A:CYS33 5.0 0.0 1.0 CG A:LEU32 5.0 0.0 1.0 CE1 A:PHE37 5.0 0.0 1.0

F.He, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, Y.Muto, S.Yokoyama. Solution Structure of Phd Domain in Protein AA017385 To Be Published.