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Zinc in PDB 1wee: Solution Structure of Phd Domain in Phd Finger Family Protein

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of Phd Domain in Phd Finger Family Protein (pdb code 1wee). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of Phd Domain in Phd Finger Family Protein, PDB code: 1wee:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1wee

Go back to Zinc Binding Sites List in 1wee
Zinc binding site 1 out of 2 in the Solution Structure of Phd Domain in Phd Finger Family Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Phd Domain in Phd Finger Family Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
SG A:CYS21 2.3 0.0 1.0
SG A:CYS45 2.3 0.0 1.0
SG A:CYS19 2.3 0.0 1.0
ND1 A:HIS42 2.4 0.0 1.0
HB2 A:HIS42 2.7 0.0 1.0
HB2 A:CYS21 3.2 0.0 1.0
CG A:HIS42 3.2 0.0 1.0
H A:CYS21 3.3 0.0 1.0
HB3 A:CYS19 3.4 0.0 1.0
CE1 A:HIS42 3.4 0.0 1.0
CB A:HIS42 3.4 0.0 1.0
CB A:CYS21 3.4 0.0 1.0
HB2 A:CYS45 3.5 0.0 1.0
CB A:CYS19 3.5 0.0 1.0
CB A:CYS45 3.5 0.0 1.0
HG2 A:LYS20 3.6 0.0 1.0
HE1 A:HIS42 3.6 0.0 1.0
HB3 A:CYS45 3.8 0.0 1.0
HB3 A:HIS42 3.8 0.0 1.0
HB2 A:CYS19 3.9 0.0 1.0
N A:CYS21 4.1 0.0 1.0
H A:HIS42 4.1 0.0 1.0
HB3 A:CYS21 4.2 0.0 1.0
CA A:CYS21 4.4 0.0 1.0
CD2 A:HIS42 4.4 0.0 1.0
NE2 A:HIS42 4.5 0.0 1.0
CG A:LYS20 4.6 0.0 1.0
H A:LYS20 4.6 0.0 1.0
HG3 A:LYS20 4.6 0.0 1.0
H A:CYS45 4.7 0.0 1.0
CA A:HIS42 4.7 0.0 1.0
HD3 A:LYS20 4.8 0.0 1.0
CA A:CYS19 4.8 0.0 1.0
N A:HIS42 4.8 0.0 1.0
N A:LYS20 4.8 0.0 1.0
CA A:CYS45 4.9 0.0 1.0
C A:CYS19 4.9 0.0 1.0
H A:GLY22 4.9 0.0 1.0
HA A:CYS21 4.9 0.0 1.0

Zinc binding site 2 out of 2 in 1wee

Go back to Zinc Binding Sites List in 1wee
Zinc binding site 2 out of 2 in the Solution Structure of Phd Domain in Phd Finger Family Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of Phd Domain in Phd Finger Family Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
SG A:CYS60 2.3 0.0 1.0
SG A:CYS63 2.3 0.0 1.0
SG A:CYS37 2.3 0.0 1.0
SG A:CYS34 2.3 0.0 1.0
H A:CYS37 2.6 0.0 1.0
H A:CYS60 2.7 0.0 1.0
HB2 A:CYS63 3.2 0.0 1.0
HB3 A:CYS60 3.4 0.0 1.0
CB A:CYS63 3.4 0.0 1.0
HB3 A:CYS34 3.4 0.0 1.0
N A:CYS37 3.4 0.0 1.0
CB A:CYS60 3.4 0.0 1.0
HB3 A:CYS37 3.5 0.0 1.0
CB A:CYS37 3.5 0.0 1.0
CB A:CYS34 3.5 0.0 1.0
N A:CYS60 3.6 0.0 1.0
HA3 A:GLY36 3.6 0.0 1.0
H A:CYS63 3.7 0.0 1.0
HB2 A:CYS34 3.8 0.0 1.0
H A:GLY38 4.0 0.0 1.0
CA A:CYS37 4.1 0.0 1.0
CA A:CYS60 4.1 0.0 1.0
HA A:LEU59 4.1 0.0 1.0
N A:CYS63 4.1 0.0 1.0
HB3 A:CYS63 4.2 0.0 1.0
HB2 A:ARG62 4.2 0.0 1.0
HD23 A:LEU59 4.2 0.0 1.0
CA A:CYS63 4.2 0.0 1.0
C A:GLY36 4.3 0.0 1.0
HB2 A:CYS60 4.4 0.0 1.0
CA A:GLY36 4.4 0.0 1.0
HB2 A:CYS37 4.4 0.0 1.0
HA A:CYS63 4.4 0.0 1.0
HD21 A:LEU59 4.5 0.0 1.0
H A:GLY36 4.5 0.0 1.0
O A:CYS34 4.6 0.0 1.0
HD12 A:LEU66 4.7 0.0 1.0
C A:LEU59 4.7 0.0 1.0
C A:CYS60 4.7 0.0 1.0
N A:GLY36 4.8 0.0 1.0
O A:CYS60 4.8 0.0 1.0
H A:VAL39 4.8 0.0 1.0
N A:GLY38 4.8 0.0 1.0
CA A:CYS34 4.8 0.0 1.0
HA A:CYS37 4.8 0.0 1.0
CA A:LEU59 4.9 0.0 1.0
CD2 A:LEU59 4.9 0.0 1.0
HB A:VAL39 4.9 0.0 1.0
HB3 A:LEU59 5.0 0.0 1.0
C A:CYS34 5.0 0.0 1.0

Reference:

F.He, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyama. Solution Structure of Phd Domain in Phd Finger Family Protein To Be Published.
Page generated: Mon Jan 25 16:15:31 2021

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