Zinc in PDB 1wdm: Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (NATIVE3)

All present enzymatic activity of Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (NATIVE3):
1.1.1.35; 2.3.1.16; 4.2.1.17; 5.1.2.3; 5.3.3.8;

The structure of Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (NATIVE3), PDB code: 1wdm was solved by M.Ishikawa, D.Tsuchiya, T.Oyama, Y.Tsunaka, K.Morikawa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 3.80
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	181.453, 95.462, 161.325, 90.00, 111.79, 90.00
R / Rfree (%)	21.4 / 26.2

The binding sites of Zinc atom in the Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (NATIVE3) (pdb code 1wdm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (NATIVE3), PDB code: 1wdm:

Zinc binding site 1 out of 1 in the Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (NATIVE3)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (NATIVE3) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn716 b:5.9 occ:1.00 NE2 A:HIS550 2.2 30.9 1.0 OD1 A:ASP573 3.1 43.4 1.0 CE1 A:HIS550 3.1 30.9 1.0 CD2 A:HIS550 3.3 30.9 1.0 OE2 A:GLU577 4.1 47.4 1.0 NH2 A:ARG553 4.2 60.7 1.0 CG A:ASP573 4.2 43.4 1.0 ND1 A:HIS550 4.3 30.9 1.0 CD2 A:TYR576 4.3 24.7 1.0 CG A:HIS550 4.4 30.9 1.0 CE2 A:TYR576 4.6 24.7 1.0 CB A:ASP573 4.8 43.4 1.0 CG A:GLU577 5.0 47.4 1.0 CD A:GLU577 5.0 47.4 1.0

M.Ishikawa, D.Tsuchiya, T.Oyama, Y.Tsunaka, K.Morikawa. Structural Basis For Channelling Mechanism of A Fatty Acid Beta-Oxidation Multienzyme Complex Embo J. V. 23 2745 2004.
ISSN: ISSN 0261-4189
PubMed: 15229654
DOI: 10.1038/SJ.EMBOJ.7600298