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Zinc in PDB 1sp2: uc(Nmr) Structure of A Zinc Finger Domain From Transcription Factor SP1F2, Minimized Average Structure

Zinc Binding Sites:

The binding sites of Zinc atom in the uc(Nmr) Structure of A Zinc Finger Domain From Transcription Factor SP1F2, Minimized Average Structure (pdb code 1sp2). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the uc(Nmr) Structure of A Zinc Finger Domain From Transcription Factor SP1F2, Minimized Average Structure, PDB code: 1sp2:

Zinc binding site 1 out of 1 in 1sp2

Go back to Zinc Binding Sites List in 1sp2
Zinc binding site 1 out of 1 in the uc(Nmr) Structure of A Zinc Finger Domain From Transcription Factor SP1F2, Minimized Average Structure


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Structure of A Zinc Finger Domain From Transcription Factor SP1F2, Minimized Average Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn32

b:0.7
occ:1.00
NE2 A:HIS23 2.0 0.7 1.0
NE2 A:HIS27 2.1 0.9 1.0
SG A:CYS10 2.2 0.7 1.0
SG A:CYS5 2.2 0.8 1.0
HD2 A:HIS27 2.6 1.1 1.0
CD2 A:HIS27 2.7 1.0 1.0
CD2 A:HIS23 2.7 0.7 1.0
HD2 A:HIS23 2.7 0.7 1.0
HB3 A:CYS5 2.8 0.6 1.0
CB A:CYS5 2.9 0.6 1.0
HB2 A:CYS10 3.0 0.8 1.0
HB2 A:CYS5 3.1 0.6 1.0
CB A:CYS10 3.1 0.7 1.0
CE1 A:HIS23 3.3 0.7 1.0
CE1 A:HIS27 3.4 0.9 1.0
HB3 A:CYS10 3.5 0.8 1.0
HB2 A:TRP7 3.5 1.0 1.0
HE1 A:HIS23 3.7 0.7 1.0
HB3 A:TRP7 3.7 0.9 1.0
HE1 A:HIS27 3.9 0.9 1.0
CG A:HIS23 4.0 0.7 1.0
CG A:HIS27 4.0 1.0 1.0
CB A:TRP7 4.1 1.0 1.0
ND1 A:HIS23 4.2 0.7 1.0
HB2 A:LYS12 4.3 0.7 1.0
ND1 A:HIS27 4.3 1.0 1.0
CA A:CYS5 4.3 0.6 1.0
H A:GLY11 4.4 0.7 1.0
CA A:CYS10 4.5 0.7 1.0
H A:LYS12 4.5 0.6 1.0
HB3 A:LYS12 4.6 0.8 1.0
HA A:CYS10 4.7 0.8 1.0
HZ A:PHE14 4.7 0.7 1.0
C A:CYS5 4.7 0.9 1.0
HA A:CYS5 4.8 0.7 1.0
HE2 A:PHE14 4.9 2.2 1.0
CB A:LYS12 5.0 0.5 1.0
N A:GLY11 5.0 0.7 1.0

Reference:

V.A.Narayan, R.W.Kriwacki, J.P.Caradonna. Structures of Zinc Finger Domains From Transcription Factor SP1. Insights Into Sequence-Specific Protein-Dna Recognition. J.Biol.Chem. V. 272 7801 1997.
ISSN: ISSN 0021-9258
PubMed: 9065444
DOI: 10.1074/JBC.272.12.7801
Page generated: Mon Jan 25 16:13:28 2021

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