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Zinc in PDB 1s0u: EIF2GAMMA Apo

Protein crystallography data

The structure of EIF2GAMMA Apo, PDB code: 1s0u was solved by A.Roll-Mecak, P.Alone, C.Cao, T.E.Dever, S.K.Burley, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.00 / 2.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 52.842, 52.490, 74.134, 90.00, 92.53, 90.00
R / Rfree (%) 21.2 / 26.4

Zinc Binding Sites:

The binding sites of Zinc atom in the EIF2GAMMA Apo (pdb code 1s0u). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the EIF2GAMMA Apo, PDB code: 1s0u:

Zinc binding site 1 out of 1 in 1s0u

Go back to Zinc Binding Sites List in 1s0u
Zinc binding site 1 out of 1 in the EIF2GAMMA Apo


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of EIF2GAMMA Apo within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1

b:60.9
occ:1.00
SG A:CYS90 2.0 52.7 1.0
SG A:CYS102 2.1 57.5 1.0
SG A:CYS87 2.2 44.7 1.0
SG A:CYS99 2.4 48.0 1.0
CB A:CYS87 2.8 40.6 1.0
CB A:CYS99 3.1 49.0 1.0
CB A:CYS90 3.5 49.6 1.0
N A:CYS90 3.7 47.4 1.0
CB A:CYS102 3.7 57.0 1.0
CG2 A:THR92 4.0 39.3 1.0
O A:CYS102 4.0 60.7 1.0
CA A:CYS90 4.1 47.5 1.0
CA A:CYS87 4.3 41.0 1.0
CB A:GLN89 4.3 46.0 1.0
N A:CYS102 4.5 59.1 1.0
CA A:CYS102 4.5 58.4 1.0
CA A:CYS99 4.6 51.0 1.0
CB A:ALA104 4.6 50.8 1.0
N A:GLY91 4.7 44.0 1.0
C A:CYS87 4.7 41.3 1.0
C A:CYS102 4.7 58.8 1.0
C A:CYS90 4.8 45.8 1.0
C A:GLN89 4.8 46.8 1.0
N A:GLN89 4.8 45.1 1.0
CA A:GLN89 4.8 45.8 1.0
O A:CYS87 4.9 42.3 1.0
N A:THR92 4.9 38.4 1.0

Reference:

A.Roll-Mecak, P.Alone, C.Cao, T.E.Dever, S.K.Burley. X-Ray Structure of Translation Initiation Factor EIF2GAMMA: Implications For Trna and EIF2ALPHA Binding. J.Biol.Chem. V. 279 10634 2004.
ISSN: ISSN 0021-9258
PubMed: 14688270
DOI: 10.1074/JBC.M310418200
Page generated: Mon Jan 25 16:13:19 2021

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