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Zinc in PDB 1r55: Crystal Structure of the Catalytic Domain of Human Adam 33

Protein crystallography data

The structure of Crystal Structure of the Catalytic Domain of Human Adam 33, PDB code: 1r55 was solved by P.Orth, P.Reichert, W.Wang, W.W.Prosise, T.Yarosh-Tomaine, G.Hammond, L.Xiao, U.A.Mirza, J.Zou, C.Strickland, S.S.Taremi, H.V.Le, V.Madison, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 1.58
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 57.990, 65.205, 99.679, 90.00, 90.00, 90.00
R / Rfree (%) 20.7 / 21.9

Other elements in 1r55:

The structure of Crystal Structure of the Catalytic Domain of Human Adam 33 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Calcium (Ca) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Catalytic Domain of Human Adam 33 (pdb code 1r55). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Catalytic Domain of Human Adam 33, PDB code: 1r55:

Zinc binding site 1 out of 1 in 1r55

Go back to Zinc Binding Sites List in 1r55
Zinc binding site 1 out of 1 in the Crystal Structure of the Catalytic Domain of Human Adam 33


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Catalytic Domain of Human Adam 33 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:15.0
occ:1.00
O4 A:097518 1.9 14.1 1.0
NE2 A:HIS349 2.1 14.2 1.0
O3 A:097518 2.1 13.2 1.0
NE2 A:HIS355 2.1 13.8 1.0
NE2 A:HIS345 2.2 13.6 1.0
O A:HOH540 2.4 23.2 1.0
C12 A:097518 2.7 13.8 1.0
N3 A:097518 2.9 12.9 1.0
CD2 A:HIS349 3.0 13.7 1.0
CD2 A:HIS345 3.0 13.4 1.0
CE1 A:HIS349 3.1 14.1 1.0
CE1 A:HIS355 3.1 15.9 1.0
CD2 A:HIS355 3.1 14.8 1.0
CE1 A:HIS345 3.2 13.9 1.0
O A:HOH558 4.1 16.1 1.0
CG A:HIS349 4.2 13.9 1.0
C13 A:097518 4.2 14.2 1.0
ND1 A:HIS349 4.2 14.7 1.0
ND1 A:HIS355 4.2 15.3 1.0
CG A:HIS345 4.2 12.9 1.0
CG A:HIS355 4.2 14.8 1.0
ND1 A:HIS345 4.3 13.5 1.0
O A:HOH663 4.4 31.8 1.0
OE1 A:GLU346 4.6 14.5 1.0
C14 A:097518 4.7 13.8 1.0
C15 A:097518 4.8 13.8 1.0
O5 A:097518 4.8 14.7 1.0
CE A:MET373 4.9 12.4 1.0

Reference:

P.Orth, P.Reichert, W.Wang, W.W.Prosise, T.Yarosh-Tomaine, G.Hammond, L.Xiao, U.A.Mirza, J.Zou, C.Strickland, S.S.Taremi, H.V.Le, V.Madison. Crystal Structre of the Catalytic Domain of Human ADAM33 J.Mol.Biol. V. 335 129 2004.
ISSN: ISSN 0022-2836
PubMed: 14659745
DOI: 10.1016/J.JMB.2003.10.037
Page generated: Wed Oct 16 18:25:19 2024

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