Atomistry » Zinc » PDB 1r22-1rad » 1r54
Atomistry »
  Zinc »
    PDB 1r22-1rad »
      1r54 »

Zinc in PDB 1r54: Crystal Structure of the Catalytic Domain of Human ADAM33

Protein crystallography data

The structure of Crystal Structure of the Catalytic Domain of Human ADAM33, PDB code: 1r54 was solved by P.Orth, P.Reicher, W.Wang, W.W.Prosise, T.Yarosh-Tomaine, G.Hammond, L.Xiao, U.A.Mirza, J.Zou, C.Strickland, S.S.Taremi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.85
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 56.476, 65.461, 99.863, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 23.3

Other elements in 1r54:

The structure of Crystal Structure of the Catalytic Domain of Human ADAM33 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Calcium (Ca) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Catalytic Domain of Human ADAM33 (pdb code 1r54). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Catalytic Domain of Human ADAM33, PDB code: 1r54:

Zinc binding site 1 out of 1 in 1r54

Go back to Zinc Binding Sites List in 1r54
Zinc binding site 1 out of 1 in the Crystal Structure of the Catalytic Domain of Human ADAM33


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Catalytic Domain of Human ADAM33 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:26.9
occ:1.00
NE2 A:HIS355 2.0 21.6 1.0
NE2 A:HIS349 2.1 19.1 1.0
NE2 A:HIS345 2.2 20.1 1.0
O A:HOH23 2.5 26.4 1.0
CE1 A:HIS355 3.0 22.4 1.0
CD2 A:HIS355 3.0 21.2 1.0
CD2 A:HIS349 3.0 19.1 1.0
CE1 A:HIS349 3.1 21.0 1.0
CD2 A:HIS345 3.1 19.5 1.0
CE1 A:HIS345 3.2 20.3 1.0
ND1 A:HIS355 4.1 20.6 1.0
CG A:HIS355 4.1 21.4 1.0
ND1 A:HIS349 4.2 20.3 1.0
CG A:HIS349 4.2 20.1 1.0
CG A:HIS345 4.3 18.4 1.0
ND1 A:HIS345 4.3 18.4 1.0
O A:HOH65 4.3 30.2 1.0
OE2 A:GLU346 4.4 25.0 1.0
O A:HOH79 4.5 39.8 1.0
CE A:MET373 4.9 17.6 1.0
O A:HOH41 5.0 32.3 1.0

Reference:

P.Orth, P.Reichert, W.Wang, W.W.Prosise, T.Yarosh-Tomaine, G.Hammond, L.Xiao, U.A.Mirza, J.Zou, C.Strickland, S.S.Taremi, H.V.Le, V.Madison. Crystal Structre of the Catalytic Domain of Human ADAM33 J.Mol.Biol. V. 335 129 2004.
ISSN: ISSN 0022-2836
PubMed: 14659745
DOI: 10.1016/J.JMB.2003.10.037
Page generated: Wed Dec 16 03:02:30 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy