Zinc in PDB 1q5w: Ubiquitin Recognition By NPL4 Zinc-Fingers

The binding sites of Zinc atom in the Ubiquitin Recognition By NPL4 Zinc-Fingers (pdb code 1q5w). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Ubiquitin Recognition By NPL4 Zinc-Fingers, PDB code: 1q5w:

Zinc binding site 1 out of 1 in the Ubiquitin Recognition By NPL4 Zinc-Fingers


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Ubiquitin Recognition By NPL4 Zinc-Fingers within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn32 b:0.0 occ:1.00 SG A:CYS12 2.3 0.0 1.0 SG A:CYS9 2.4 0.0 1.0 SG A:CYS26 2.4 0.0 1.0 SG A:CYS23 2.4 0.0 1.0 H A:CYS26 3.0 0.0 1.0 H A:CYS12 3.1 0.0 1.0 HB3 A:CYS23 3.1 0.0 1.0 HB3 A:PHE14 3.2 0.0 1.0 HB3 A:CYS26 3.2 0.0 1.0 CB A:CYS23 3.2 0.0 1.0 HB2 A:CYS23 3.2 0.0 1.0 HB3 A:CYS12 3.3 0.0 1.0 HB2 A:CYS9 3.3 0.0 1.0 HB2 A:MET25 3.4 0.0 1.0 CB A:CYS9 3.4 0.0 1.0 CB A:CYS26 3.4 0.0 1.0 CB A:CYS12 3.4 0.0 1.0 HB3 A:CYS9 3.6 0.0 1.0 H A:PHE14 3.6 0.0 1.0 N A:CYS26 3.8 0.0 1.0 HB2 A:HIS11 3.9 0.0 1.0 N A:CYS12 3.9 0.0 1.0 HD2 A:HIS11 4.2 0.0 1.0 CA A:CYS26 4.2 0.0 1.0 CB A:PHE14 4.2 0.0 1.0 CA A:CYS12 4.2 0.0 1.0 H A:THR13 4.2 0.0 1.0 HB2 A:CYS26 4.3 0.0 1.0 HD2 A:PHE14 4.3 0.0 1.0 HG23 B:VAL170 4.3 0.0 1.0 HB2 A:CYS12 4.3 0.0 1.0 HB2 A:LEU28 4.4 0.0 1.0 HD21 A:LEU28 4.4 0.0 1.0 H A:MET25 4.4 0.0 1.0 H A:HIS11 4.4 0.0 1.0 CB A:MET25 4.4 0.0 1.0 HD22 A:ASN16 4.5 0.0 1.0 HB2 A:PHE14 4.5 0.0 1.0 HG12 B:VAL170 4.5 0.0 1.0 N A:PHE14 4.5 0.0 1.0 H A:LEU28 4.6 0.0 1.0 HD13 B:LEU108 4.6 0.0 1.0 H A:SER27 4.6 0.0 1.0 HD12 B:LEU108 4.7 0.0 1.0 CA A:CYS23 4.7 0.0 1.0 N A:THR13 4.7 0.0 1.0 C A:CYS12 4.8 0.0 1.0 OD1 A:ASN16 4.8 0.0 1.0 CA A:CYS9 4.8 0.0 1.0 C A:MET25 4.8 0.0 1.0 HG2 A:MET25 4.9 0.0 1.0 CB A:HIS11 4.9 0.0 1.0 HA A:CYS9 4.9 0.0 1.0 CA A:PHE14 5.0 0.0 1.0 HB3 A:MET25 5.0 0.0 1.0 CD2 A:PHE14 5.0 0.0 1.0 HA A:CYS26 5.0 0.0 1.0

S.L.Alam, J.Sun, M.Payne, B.D.Welch, B.K.Blake, D.R.Davis, H.H.Meyer, S.D.Emr, W.I.Sundquist. Ubiquitin Interactions of Nzf Zinc Fingers. Embo J. V. 23 1411 2004.
ISSN: ISSN 0261-4189
PubMed: 15029239
DOI: 10.1038/SJ.EMBOJ.7600114