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Zinc in PDB 1q1n: Apo and Holo Structures of An Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae

Protein crystallography data

The structure of Apo and Holo Structures of An Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae, PDB code: 1q1n was solved by E.Valencia, C.Larroy, W.F.Ochoa, X.Pares, I.Fita, J.A.Biosca, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 5.00 / 3.15
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 101.900, 101.900, 149.150, 90.00, 90.00, 120.00
R / Rfree (%) 24 / 28.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Apo and Holo Structures of An Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae (pdb code 1q1n). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Apo and Holo Structures of An Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae, PDB code: 1q1n:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1q1n

Go back to Zinc Binding Sites List in 1q1n
Zinc binding site 1 out of 2 in the Apo and Holo Structures of An Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Apo and Holo Structures of An Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1501

b:51.7
occ:1.00
SG A:CYS106 2.3 24.7 1.0
SG A:CYS100 2.4 37.5 1.0
SG A:CYS103 2.4 44.2 1.0
SG A:CYS114 2.6 34.4 1.0
CB A:CYS114 3.2 31.5 1.0
CB A:CYS100 3.4 35.7 1.0
CB A:CYS103 3.4 46.1 1.0
N A:CYS100 3.7 34.9 1.0
OG A:SER99 3.8 31.9 1.0
CB A:CYS106 3.8 31.6 1.0
N A:LEU101 3.9 39.0 1.0
CA A:CYS100 4.0 36.5 1.0
CA A:CYS114 4.0 29.6 1.0
N A:CYS103 4.1 45.3 1.0
CA A:CYS103 4.3 45.0 1.0
C A:CYS100 4.3 37.6 1.0
N A:CYS106 4.4 33.7 1.0
N A:THR115 4.5 29.7 1.0
CA A:CYS106 4.7 33.0 1.0
C A:CYS114 4.7 29.3 1.0
N A:GLU102 4.7 45.7 1.0
C A:SER99 4.9 33.2 1.0
CA A:LEU101 4.9 40.7 1.0

Zinc binding site 2 out of 2 in 1q1n

Go back to Zinc Binding Sites List in 1q1n
Zinc binding site 2 out of 2 in the Apo and Holo Structures of An Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Apo and Holo Structures of An Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1502

b:59.2
occ:1.00
NE2 A:HIS68 2.4 22.8 1.0
SG A:CYS163 2.4 23.1 1.0
SG A:CYS46 2.6 30.4 1.0
CE1 A:HIS68 2.8 24.2 1.0
OG A:SER48 3.2 36.1 1.0
CB A:SER48 3.6 34.3 1.0
CD2 A:HIS68 3.6 24.5 1.0
CB A:CYS46 3.9 36.2 1.0
CB A:CYS163 3.9 24.5 1.0
ND1 A:HIS68 4.1 22.7 1.0
CG A:HIS68 4.5 23.0 1.0
CB A:ALA95 4.8 27.1 1.0
N A:SER48 4.8 33.8 1.0
CA A:SER48 4.9 33.0 1.0

Reference:

E.Valencia, C.Larroy, W.F.Ochoa, X.Pares, I.Fita, J.A.Biosca. Apo and Holo Structures of An Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae J.Mol.Biol. V. 341 1049 2004.
ISSN: ISSN 0022-2836
PubMed: 15289102
DOI: 10.1016/J.JMB.2004.06.037
Page generated: Wed Dec 16 03:01:30 2020

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