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Zinc in PDB 1pmi: Candida Albicans Phosphomannose Isomerase

Enzymatic activity of Candida Albicans Phosphomannose Isomerase

All present enzymatic activity of Candida Albicans Phosphomannose Isomerase:
5.3.1.8;

Protein crystallography data

The structure of Candida Albicans Phosphomannose Isomerase, PDB code: 1pmi was solved by A.Cleasby, T.Skarzynski, A.Wonacott, G.J.Davies, R.E.Hubbard, A.E.I.Proudfoot, T.N.C.Wells, M.A.Payton, A.R.Bernard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 7.00 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 124.830, 52.920, 85.730, 90.00, 127.54, 90.00
R / Rfree (%) n/a / n/a

Zinc Binding Sites:

The binding sites of Zinc atom in the Candida Albicans Phosphomannose Isomerase (pdb code 1pmi). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Candida Albicans Phosphomannose Isomerase, PDB code: 1pmi:

Zinc binding site 1 out of 1 in 1pmi

Go back to Zinc Binding Sites List in 1pmi
Zinc binding site 1 out of 1 in the Candida Albicans Phosphomannose Isomerase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Candida Albicans Phosphomannose Isomerase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn445

b:12.9
occ:1.00
NE2 A:HIS285 2.1 10.4 1.0
NE2 A:HIS113 2.1 10.4 1.0
OE1 A:GLN111 2.2 11.8 1.0
OE1 A:GLU138 2.2 10.9 1.0
O A:HOH798 2.2 12.1 1.0
CD A:GLU138 2.7 13.2 1.0
OE2 A:GLU138 2.9 12.3 1.0
CD2 A:HIS285 3.1 9.4 1.0
CE1 A:HIS113 3.1 12.8 1.0
CE1 A:HIS285 3.1 10.5 1.0
CD2 A:HIS113 3.2 10.0 1.0
CD A:GLN111 3.2 14.5 1.0
CG A:GLN111 3.7 14.3 1.0
O A:HOH745 4.1 26.5 1.0
CG A:HIS285 4.2 8.2 1.0
ND1 A:HIS285 4.2 11.4 1.0
ND1 A:HIS113 4.2 11.0 1.0
O A:HOH825 4.3 23.4 1.0
CG A:GLU138 4.3 10.4 1.0
CG A:HIS113 4.3 11.7 1.0
NE2 A:GLN111 4.3 11.5 1.0
O A:HOH501 4.5 21.5 1.0
CB A:GLU138 4.8 10.3 1.0
OH A:TYR287 4.8 19.9 1.0
CG A:LEU279 4.9 14.2 1.0
CB A:GLN111 4.9 12.0 1.0
CB A:LEU279 5.0 10.7 1.0

Reference:

A.Cleasby, A.Wonacott, T.Skarzynski, R.E.Hubbard, G.J.Davies, A.E.Proudfoot, A.R.Bernard, M.A.Payton, T.N.Wells. The X-Ray Crystal Structure of Phosphomannose Isomerase From Candida Albicans at 1.7 Angstrom Resolution. Nat.Struct.Biol. V. 3 470 1996.
ISSN: ISSN 1072-8368
PubMed: 8612079
DOI: 10.1038/NSB0596-470
Page generated: Wed Dec 16 03:00:50 2020

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