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Zinc in PDB 1pi6: Yeast Actin Interacting Protein 1 (AIP1), Orthorhombic Crystal Form

Protein crystallography data

The structure of Yeast Actin Interacting Protein 1 (AIP1), Orthorhombic Crystal Form, PDB code: 1pi6 was solved by W.C.Voegtli, A.Y.Madrona, D.K.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.82 / 2.50
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 69.120, 154.430, 62.110, 90.00, 90.00, 90.00
R / Rfree (%) 21.9 / 26.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Yeast Actin Interacting Protein 1 (AIP1), Orthorhombic Crystal Form (pdb code 1pi6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Yeast Actin Interacting Protein 1 (AIP1), Orthorhombic Crystal Form, PDB code: 1pi6:

Zinc binding site 1 out of 1 in 1pi6

Go back to Zinc Binding Sites List in 1pi6
Zinc binding site 1 out of 1 in the Yeast Actin Interacting Protein 1 (AIP1), Orthorhombic Crystal Form


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Yeast Actin Interacting Protein 1 (AIP1), Orthorhombic Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn650

b:22.3
occ:1.00
ND1 A:HIS368 1.9 9.5 1.0
OD2 A:ASP370 1.9 17.2 1.0
CG A:ASP370 2.8 17.4 1.0
CE1 A:HIS368 2.8 11.3 1.0
CG A:HIS368 2.9 12.6 1.0
OD1 A:ASP370 3.0 17.3 1.0
CB A:HIS368 3.3 11.7 1.0
O A:HOH714 3.9 20.8 1.0
NE2 A:HIS368 3.9 11.4 1.0
CD2 A:HIS368 4.0 11.6 1.0
CA A:HIS368 4.1 11.4 1.0
CB A:ASP370 4.2 15.6 1.0
CA A:GLY399 4.3 10.7 1.0
O A:HOH731 4.4 35.7 1.0
OH A:TYR386 4.6 14.6 1.0
N A:GLN369 4.8 11.7 1.0
C A:HIS368 4.9 12.7 1.0
N A:GLY399 5.0 13.1 1.0

Reference:

W.C.Voegtli, A.Y.Madrona, D.K.Wilson. The Structure of AIP1P, A Wd Repeat Protein That Regulates Cofilin-Mediated Actin Depolymerization. J.Biol.Chem. V. 278 34373 2003.
ISSN: ISSN 0021-9258
PubMed: 12807914
DOI: 10.1074/JBC.M302773200
Page generated: Wed Dec 16 03:00:48 2020

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