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Zinc in the structure of Rat Neuronal Nos Heme Domain With (4S)-N-(4-Amino-5- [Aminoethyl]Aminopentyl)-N'-Nitroguanidine Bound (pdb 1p6i)

The binding sites of Zinc atom in the structure of Rat Neuronal Nos Heme Domain With (4S)-N-(4-Amino-5- [Aminoethyl]Aminopentyl)-N'-Nitroguanidine Bound (pdb code 1p6i). This binding sites where shown with 5.0 Angstroms radius around Zinc atom.
The 1p6i structure was solved by M.L.FLINSPACH, H.LI, J.JAMAL, W.YANG, H.HUANG, J.-M.HAH, J.A.GOMEZ-VIDAL, E.A.LITZINGER, R.B.SILVERMAN, T.L.POULOS, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)32.0-1.9
Space groupP212121
a (A)51.110
b (A)110.690
c (A)164.360
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)22.8
Rfree (%)25.6

Zinc Binding Sites:

Zinc binding site 1 out of 1 in 1p6i

Zinc binding site 1 out of 1 in 1p6i
Click to enlarge
stereopicture of Zinc binding site 1 out of 1 in 1p6i
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Zinc in the PDB 1p6i. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Cys326, A: Cys331, A: Met332, A: Gly333, B: Cys326, B: Cys331, B: Met332, B: Gly333, A: Hoh1083,

conact list:

AtomAtomDistance (A)
ZnCB A:Cys3263.35
ZnSG A:Cys3262.30
ZnCA A:Cys3264.73
ZnN A:Cys3314.77
ZnCB A:Cys3313.23
ZnSG A:Cys3312.32
ZnC A:Cys3314.06
ZnCA A:Cys3313.48
ZnN A:Met3323.84
ZnC A:Met3324.85
ZnCA A:Met3324.96
ZnN A:Gly3334.03
ZnCA A:Gly3334.49
ZnCB B:Cys3263.46
ZnSG B:Cys3262.31
ZnCA B:Cys3264.85
ZnN B:Cys3314.84
ZnCB B:Cys3313.25
ZnSG B:Cys3312.34
ZnC B:Cys3314.21
ZnCA B:Cys3313.57
ZnN B:Met3324.05
ZnC B:Met3325.00
ZnN B:Gly3334.16
ZnCA B:Gly3334.53
ZnO A:Hoh10834.80

interactive model:

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