Zinc in PDB 1o5r: Crystal Structure of Adenosine Deaminase Complexed with A Potent Inhibitor

All present enzymatic activity of Crystal Structure of Adenosine Deaminase Complexed with A Potent Inhibitor:
3.5.4.4;

The structure of Crystal Structure of Adenosine Deaminase Complexed with A Potent Inhibitor, PDB code: 1o5r was solved by T.Kinoshita, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	12.00 / 2.35
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	78.440, 78.440, 137.710, 90.00, 90.00, 90.00
R / Rfree (%)	n/a / n/a

The binding sites of Zinc atom in the Crystal Structure of Adenosine Deaminase Complexed with A Potent Inhibitor (pdb code 1o5r). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Adenosine Deaminase Complexed with A Potent Inhibitor, PDB code: 1o5r:

Zinc binding site 1 out of 1 in the Crystal Structure of Adenosine Deaminase Complexed with A Potent Inhibitor


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Adenosine Deaminase Complexed with A Potent Inhibitor within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn400 b:27.1 occ:1.00 O A:HOH1005 1.8 30.0 1.0 NE2 A:HIS17 1.9 11.6 1.0 NE2 A:HIS15 2.1 22.0 1.0 NE2 A:HIS214 2.2 23.6 1.0 OD2 A:ASP295 2.3 19.5 1.0 CD2 A:HIS17 2.9 11.4 1.0 CD2 A:HIS15 2.9 21.8 1.0 CE1 A:HIS17 3.0 11.6 1.0 CE1 A:HIS214 3.0 21.1 1.0 CE1 A:HIS15 3.2 22.4 1.0 CD2 A:HIS214 3.3 18.2 1.0 CG A:ASP295 3.4 21.4 1.0 OD1 A:ASP295 3.8 19.1 1.0 CG A:HIS17 4.0 10.7 1.0 C8 A:FR91001 4.0 22.0 1.0 O9 A:FR91001 4.1 25.9 1.0 ND1 A:HIS17 4.1 9.0 1.0 CG A:HIS15 4.1 19.5 1.0 NE2 A:HIS238 4.2 15.9 1.0 O A:HOH1004 4.2 26.0 1.0 ND1 A:HIS214 4.3 19.9 1.0 ND1 A:HIS15 4.3 20.2 1.0 N10 A:FR91001 4.3 24.5 1.0 CG A:HIS214 4.4 19.1 1.0 C5 A:FR91001 4.5 17.6 1.0 CB A:ASP295 4.6 18.6 1.0 NH1 A:ARG101 4.7 22.3 1.0 O A:HOH1010 4.7 46.3 1.0 CD A:ARG101 4.7 19.9 1.0 CD2 A:HIS238 4.9 18.4 1.0

T.Terasaka, T.Kinoshita, M.Kuno, N.Seki, K.Tanaka, I.Nakanishi. Structure-Based Design, Synthesis, and Structure-Activity Relationship Studies of Novel Non-Nucleoside Adenosine Deaminase Inhibitors J.Med.Chem. V. 47 3730 2004.
ISSN: ISSN 0022-2623
PubMed: 15239652
DOI: 10.1021/JM0306374