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Zinc in PDB 1i4x: Staphylococcal Enterotoxin C2, Monoclinic Form Crystallized at pH 8.0

Protein crystallography data

The structure of Staphylococcal Enterotoxin C2, Monoclinic Form Crystallized at pH 8.0, PDB code: 1i4x was solved by S.Swaminathan, M.Sax, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 2.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 43.300, 70.360, 42.200, 90.00, 90.30, 90.00
R / Rfree (%) 20.7 / n/a

Zinc Binding Sites:

The binding sites of Zinc atom in the Staphylococcal Enterotoxin C2, Monoclinic Form Crystallized at pH 8.0 (pdb code 1i4x). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Staphylococcal Enterotoxin C2, Monoclinic Form Crystallized at pH 8.0, PDB code: 1i4x:

Zinc binding site 1 out of 1 in 1i4x

Go back to Zinc Binding Sites List in 1i4x
Zinc binding site 1 out of 1 in the Staphylococcal Enterotoxin C2, Monoclinic Form Crystallized at pH 8.0


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Staphylococcal Enterotoxin C2, Monoclinic Form Crystallized at pH 8.0 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn240

b:10.7
occ:1.00
OD2 A:ASP83 1.9 2.0 1.0
NE2 A:HIS122 2.0 5.6 1.0
ND1 A:HIS118 2.0 7.9 1.0
CE1 A:HIS118 2.5 4.7 1.0
CE1 A:HIS122 2.8 8.1 1.0
CG A:ASP83 2.8 3.0 1.0
CD2 A:HIS122 3.1 5.1 1.0
OD1 A:ASP83 3.1 5.1 1.0
CG A:HIS118 3.3 7.3 1.0
NE2 A:HIS118 3.8 3.1 1.0
O A:THR36 3.8 10.2 1.0
ND1 A:HIS122 4.0 7.2 1.0
CB A:HIS118 4.0 4.2 1.0
CD2 A:HIS118 4.1 5.5 1.0
CG A:HIS122 4.1 2.8 1.0
CB A:ASP83 4.3 2.0 1.0
OG1 A:THR36 4.4 4.5 1.0
CA A:HIS118 4.5 6.2 1.0
O A:HIS118 4.8 10.4 1.0
CG A:LYS37 4.8 2.0 1.0
C A:THR36 4.9 8.4 1.0
CG2 A:THR36 5.0 9.1 1.0

Reference:

D.Kumaran, S.Eswaramoorthy, W.Furey, M.Sax, S.Swaminathan. Structure of Staphylococcal Enterotoxin C2 at Various pH Levels. Acta Crystallogr.,Sect.D V. 57 1270 2001.
ISSN: ISSN 0907-4449
PubMed: 11526318
DOI: 10.1107/S0907444901011118
Page generated: Wed Dec 16 02:52:15 2020

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