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Zinc in PDB 1ej6: Reovirus Core

Protein crystallography data

The structure of Reovirus Core, PDB code: 1ej6 was solved by K.M.Reinisch, M.L.Nibert, S.C.Harrison, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 3.60
Space group F 4 3 2 9
Cell size a, b, c (Å), α, β, γ (°) 1255.000, 1255.000, 1255.000, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 20.8

Zinc Binding Sites:

The binding sites of Zinc atom in the Reovirus Core (pdb code 1ej6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Reovirus Core, PDB code: 1ej6:

Zinc binding site 1 out of 1 in 1ej6

Go back to Zinc Binding Sites List in 1ej6
Zinc binding site 1 out of 1 in the Reovirus Core


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Reovirus Core within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn2000

b:2.0
occ:1.00
NE2 C:HIS199 2.4 27.1 1.0
NE2 C:HIS203 2.4 22.2 1.0
SG C:CYS186 2.5 20.9 1.0
SG C:CYS183 2.6 22.5 1.0
CD2 C:HIS203 3.1 19.4 1.0
CD2 C:HIS199 3.3 24.7 1.0
CE1 C:HIS199 3.3 27.9 1.0
CB C:CYS183 3.4 26.0 1.0
CB C:CYS186 3.5 17.4 1.0
CE1 C:HIS203 3.5 23.4 1.0
N C:CYS186 3.6 14.1 1.0
CA C:CYS186 4.1 17.5 1.0
CB C:VAL185 4.1 17.0 1.0
ND1 C:HIS199 4.4 27.8 1.0
CG C:HIS199 4.4 24.6 1.0
CG C:HIS203 4.4 20.7 1.0
ND1 C:HIS203 4.5 22.9 1.0
C C:VAL185 4.6 14.0 1.0
CB C:ALA188 4.7 19.1 1.0
C C:CYS186 4.8 13.6 1.0
CG2 C:VAL185 4.8 19.9 1.0
O C:CYS183 4.8 30.5 1.0
CA C:VAL185 4.8 14.8 1.0
N C:SER187 4.8 15.0 1.0
CA C:CYS183 4.8 27.3 1.0
CG1 C:VAL185 4.9 15.3 1.0
N C:VAL185 4.9 21.4 1.0
N C:ALA188 4.9 13.7 1.0

Reference:

K.M.Reinisch, M.L.Nibert, S.C.Harrison. Structure of the Reovirus Core at 3.6 A Resolution. Nature V. 404 960 2000.
ISSN: ISSN 0028-0836
PubMed: 10801118
DOI: 10.1038/35010041
Page generated: Wed Dec 16 02:48:27 2020

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