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Zinc in PDB 1ef4: Solution Structure of the Essential Rna Polymerase Subunit RPB10 From Methanobacterium Thermoautotrophicum

Enzymatic activity of Solution Structure of the Essential Rna Polymerase Subunit RPB10 From Methanobacterium Thermoautotrophicum

All present enzymatic activity of Solution Structure of the Essential Rna Polymerase Subunit RPB10 From Methanobacterium Thermoautotrophicum:
2.7.7.6;

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Essential Rna Polymerase Subunit RPB10 From Methanobacterium Thermoautotrophicum (pdb code 1ef4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of the Essential Rna Polymerase Subunit RPB10 From Methanobacterium Thermoautotrophicum, PDB code: 1ef4:

Zinc binding site 1 out of 1 in 1ef4

Go back to Zinc Binding Sites List in 1ef4
Zinc binding site 1 out of 1 in the Solution Structure of the Essential Rna Polymerase Subunit RPB10 From Methanobacterium Thermoautotrophicum


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Essential Rna Polymerase Subunit RPB10 From Methanobacterium Thermoautotrophicum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn56

b:0.0
occ:1.00
SG A:CYS6 2.2 0.0 1.0
SG A:CYS9 2.2 0.0 1.0
SG A:CYS44 2.3 0.0 1.0
SG A:CYS43 2.3 0.0 1.0
HB3 A:CYS6 2.9 0.0 1.0
HB2 A:CYS9 2.9 0.0 1.0
CB A:CYS9 3.1 0.0 1.0
HB2 A:ARG41 3.2 0.0 1.0
CB A:CYS6 3.2 0.0 1.0
HA A:CYS9 3.7 0.0 1.0
H A:CYS44 3.7 0.0 1.0
HB2 A:CYS6 3.9 0.0 1.0
CA A:CYS9 3.9 0.0 1.0
CB A:CYS43 3.9 0.0 1.0
N A:CYS44 3.9 0.0 1.0
CB A:CYS44 3.9 0.0 1.0
HD2 A:ARG41 4.0 0.0 1.0
HB3 A:CYS9 4.0 0.0 1.0
O A:LYS40 4.0 0.0 1.0
HB2 A:CYS43 4.0 0.0 1.0
CB A:ARG41 4.1 0.0 1.0
N A:CYS9 4.2 0.0 1.0
H A:SER8 4.2 0.0 1.0
HB3 A:ARG41 4.2 0.0 1.0
CA A:CYS6 4.3 0.0 1.0
H A:CYS9 4.3 0.0 1.0
HA A:CYS6 4.4 0.0 1.0
HB3 A:CYS44 4.4 0.0 1.0
CA A:CYS44 4.4 0.0 1.0
C A:CYS43 4.4 0.0 1.0
HA A:CYS44 4.5 0.0 1.0
C A:CYS6 4.5 0.0 1.0
O A:ARG41 4.6 0.0 1.0
HB2 A:CYS44 4.6 0.0 1.0
HB3 A:CYS43 4.6 0.0 1.0
CA A:CYS43 4.6 0.0 1.0
O A:CYS6 4.7 0.0 1.0
HG3 A:ARG41 4.7 0.0 1.0
H A:CYS43 4.8 0.0 1.0
CG A:ARG41 4.8 0.0 1.0
CD A:ARG41 4.8 0.0 1.0
C A:SER8 4.9 0.0 1.0
N A:CYS43 4.9 0.0 1.0

Reference:

C.D.Mackereth, C.H.Arrowsmith, A.M.Edwards, L.P.Mcintosh. Zinc-Bundle Structure of the Essential Rna Polymerase Subunit RPB10 From Methanobacterium Thermoautotrophicum. Proc.Natl.Acad.Sci.Usa V. 97 6316 2000.
ISSN: ISSN 0027-8424
PubMed: 10841539
DOI: 10.1073/PNAS.97.12.6316
Page generated: Wed Dec 16 02:48:21 2020

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