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Zinc in PDB 1dmi: Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with 6S-H4B

Enzymatic activity of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with 6S-H4B

All present enzymatic activity of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with 6S-H4B:
1.14.13.39;

Protein crystallography data

The structure of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with 6S-H4B, PDB code: 1dmi was solved by C.S.Raman, H.Li, P.Martasek, P.Kotsonis, W.Pfleiderer, H.H.H.W.Schmidt, B.S.S.Masters, T.L.Poulos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.59 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 58.630, 106.560, 156.790, 90.00, 90.00, 90.00
R / Rfree (%) 22.9 / 26.4

Other elements in 1dmi:

The structure of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with 6S-H4B also contains other interesting chemical elements:

Arsenic (As) 2 atoms
Iron (Fe) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with 6S-H4B (pdb code 1dmi). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with 6S-H4B, PDB code: 1dmi:

Zinc binding site 1 out of 1 in 1dmi

Go back to Zinc Binding Sites List in 1dmi
Zinc binding site 1 out of 1 in the Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with 6S-H4B


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with 6S-H4B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn900

b:69.1
occ:1.00
SG B:CYS101 2.3 73.3 1.0
SG A:CYS101 2.3 73.1 1.0
SG B:CYS96 2.3 74.4 1.0
SG A:CYS96 2.3 75.4 1.0
CB B:CYS101 3.2 75.9 1.0
CB A:CYS101 3.3 77.0 1.0
CB A:CYS96 3.5 82.5 1.0
CB B:CYS96 3.6 80.9 1.0
CA B:CYS101 3.8 77.0 1.0
CA A:CYS101 3.8 78.3 1.0
N B:GLY103 4.1 77.5 1.0
N A:GLY103 4.2 76.8 1.0
N B:LEU102 4.2 77.0 1.0
C A:CYS101 4.3 77.9 1.0
N A:LEU102 4.3 77.5 1.0
C B:CYS101 4.3 77.0 1.0
CA A:GLY103 4.4 76.5 1.0
CA B:GLY103 4.5 77.9 1.0
CA A:CYS96 4.8 84.8 1.0
CA B:CYS96 4.9 82.4 1.0
C A:LEU102 5.0 77.3 1.0

Reference:

C.S.Raman, H.Li, P.Martasek, P.Kotsonis, W.Pfleiderer, H.H.H.W.Schmidt, G.J.Southan, B.S.S.Masters, T.L.Poulos. Crystal Structures of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with the Pterin Analogues To Be Published.
Page generated: Mon Jan 25 16:08:43 2021

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