Zinc in PDB 1cxx: Mutant R122A of Quail Cysteine and Glycine-Rich Protein, uc(Nmr), Minimized Structure
Zinc Binding Sites:
The binding sites of Zinc atom in the Mutant R122A of Quail Cysteine and Glycine-Rich Protein, uc(Nmr), Minimized Structure
(pdb code 1cxx). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Mutant R122A of Quail Cysteine and Glycine-Rich Protein, uc(Nmr), Minimized Structure, PDB code: 1cxx:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 1cxx
Go back to
Zinc Binding Sites List in 1cxx
Zinc binding site 1 out
of 2 in the Mutant R122A of Quail Cysteine and Glycine-Rich Protein, uc(Nmr), Minimized Structure
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Mutant R122A of Quail Cysteine and Glycine-Rich Protein, uc(Nmr), Minimized Structure within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn1
b:0.0
occ:1.00
|
ND1
|
A:HIS141
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS120
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS144
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS123
|
2.3
|
0.0
|
1.0
|
HB3
|
A:CYS120
|
2.9
|
0.0
|
1.0
|
CE1
|
A:HIS141
|
3.0
|
0.0
|
1.0
|
H
|
A:CYS123
|
3.0
|
0.0
|
1.0
|
HB2
|
A:HIS141
|
3.0
|
0.0
|
1.0
|
CG
|
A:HIS141
|
3.1
|
0.0
|
1.0
|
CB
|
A:CYS120
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS123
|
3.2
|
0.0
|
1.0
|
HE1
|
A:HIS141
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS144
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS144
|
3.3
|
0.0
|
1.0
|
H
|
A:HIS141
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS123
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS120
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS144
|
3.5
|
0.0
|
1.0
|
HB1
|
A:ALA122
|
3.5
|
0.0
|
1.0
|
CB
|
A:HIS141
|
3.5
|
0.0
|
1.0
|
N
|
A:CYS123
|
3.8
|
0.0
|
1.0
|
N
|
A:HIS141
|
4.1
|
0.0
|
1.0
|
HB2
|
A:ASP125
|
4.1
|
0.0
|
1.0
|
NE2
|
A:HIS141
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS123
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS123
|
4.2
|
0.0
|
1.0
|
CD2
|
A:HIS141
|
4.2
|
0.0
|
1.0
|
H
|
A:ASP125
|
4.2
|
0.0
|
1.0
|
H
|
A:ALA122
|
4.3
|
0.0
|
1.0
|
HB3
|
A:HIS141
|
4.3
|
0.0
|
1.0
|
CA
|
A:HIS141
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS120
|
4.5
|
0.0
|
1.0
|
H
|
A:GLY124
|
4.5
|
0.0
|
1.0
|
CB
|
A:ALA122
|
4.5
|
0.0
|
1.0
|
HA
|
A:TRP140
|
4.7
|
0.0
|
1.0
|
H
|
A:CYS144
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS144
|
4.7
|
0.0
|
1.0
|
O
|
A:ASP125
|
4.8
|
0.0
|
1.0
|
O
|
A:CYS120
|
4.8
|
0.0
|
1.0
|
C
|
A:CYS120
|
4.9
|
0.0
|
1.0
|
C
|
A:ALA122
|
4.9
|
0.0
|
1.0
|
HG12
|
A:VAL127
|
4.9
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 1cxx
Go back to
Zinc Binding Sites List in 1cxx
Zinc binding site 2 out
of 2 in the Mutant R122A of Quail Cysteine and Glycine-Rich Protein, uc(Nmr), Minimized Structure
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Mutant R122A of Quail Cysteine and Glycine-Rich Protein, uc(Nmr), Minimized Structure within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn2
b:0.0
occ:1.00
|
SG
|
A:CYS171
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS147
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS168
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS150
|
2.3
|
0.0
|
1.0
|
H
|
A:CYS150
|
2.7
|
0.0
|
1.0
|
HB2
|
A:CYS171
|
3.1
|
0.0
|
1.0
|
HB2
|
A:LYS149
|
3.2
|
0.0
|
1.0
|
H
|
A:CYS168
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS147
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS147
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS171
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS150
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS147
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS168
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS150
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS168
|
3.4
|
0.0
|
1.0
|
H
|
A:GLY151
|
3.4
|
0.0
|
1.0
|
HG2
|
A:LYS152
|
3.6
|
0.0
|
1.0
|
N
|
A:CYS150
|
3.6
|
0.0
|
1.0
|
HE3
|
A:LYS152
|
3.6
|
0.0
|
1.0
|
H
|
A:CYS171
|
3.8
|
0.0
|
1.0
|
N
|
A:CYS168
|
4.0
|
0.0
|
1.0
|
H
|
A:LYS149
|
4.0
|
0.0
|
1.0
|
CA
|
A:CYS150
|
4.1
|
0.0
|
1.0
|
HB3
|
A:CYS171
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS171
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS168
|
4.2
|
0.0
|
1.0
|
CB
|
A:LYS149
|
4.2
|
0.0
|
1.0
|
H
|
A:LYS152
|
4.2
|
0.0
|
1.0
|
HZ1
|
A:LYS174
|
4.2
|
0.0
|
1.0
|
HA
|
A:CYS171
|
4.3
|
0.0
|
1.0
|
N
|
A:CYS171
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS150
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS168
|
4.3
|
0.0
|
1.0
|
N
|
A:GLY151
|
4.3
|
0.0
|
1.0
|
O
|
A:CYS168
|
4.3
|
0.0
|
1.0
|
HB3
|
A:LYS149
|
4.5
|
0.0
|
1.0
|
HB3
|
A:TYR167
|
4.5
|
0.0
|
1.0
|
CG
|
A:LYS152
|
4.6
|
0.0
|
1.0
|
CE
|
A:LYS152
|
4.6
|
0.0
|
1.0
|
C
|
A:CYS168
|
4.7
|
0.0
|
1.0
|
C
|
A:LYS149
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS147
|
4.7
|
0.0
|
1.0
|
N
|
A:LYS149
|
4.8
|
0.0
|
1.0
|
C
|
A:CYS150
|
4.8
|
0.0
|
1.0
|
HG3
|
A:LYS149
|
4.8
|
0.0
|
1.0
|
CA
|
A:LYS149
|
4.8
|
0.0
|
1.0
|
HA
|
A:TYR167
|
4.8
|
0.0
|
1.0
|
HZ3
|
A:LYS152
|
4.9
|
0.0
|
1.0
|
HG3
|
A:LYS152
|
4.9
|
0.0
|
1.0
|
H
|
A:ALA148
|
5.0
|
0.0
|
1.0
|
HA
|
A:CYS150
|
5.0
|
0.0
|
1.0
|
HA
|
A:CYS147
|
5.0
|
0.0
|
1.0
|
|
Reference:
K.Kloiber,
R.Weiskirchen,
B.Krautler,
K.Bister,
R.Konrat.
Mutational Analysis and uc(Nmr) Spectroscopy of Quail Cysteine and Glycine-Rich Protein CRP2 Reveal An Intrinsic Segmental Flexibility of Lim Domains. J.Mol.Biol. V. 292 893 1999.
ISSN: ISSN 0022-2836
PubMed: 10525413
DOI: 10.1006/JMBI.1999.3118
Page generated: Sat Oct 12 23:20:19 2024
|