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Zinc in PDB 1azv: Familial Als Mutant G37R Cuznsod (Human)

Enzymatic activity of Familial Als Mutant G37R Cuznsod (Human)

All present enzymatic activity of Familial Als Mutant G37R Cuznsod (Human):
1.15.1.1;

Protein crystallography data

The structure of Familial Als Mutant G37R Cuznsod (Human), PDB code: 1azv was solved by P.J.Hart, H.Liu, M.Pellegrini, A.M.Nersissian, E.B.Gralla, J.S.Valentine, D.Eisenberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.90
Space group P 41
Cell size a, b, c (Å), α, β, γ (°) 67.200, 67.200, 83.800, 90.00, 90.00, 90.00
R / Rfree (%) 20.2 / 24.4

Other elements in 1azv:

The structure of Familial Als Mutant G37R Cuznsod (Human) also contains other interesting chemical elements:

Copper (Cu) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Familial Als Mutant G37R Cuznsod (Human) (pdb code 1azv). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Familial Als Mutant G37R Cuznsod (Human), PDB code: 1azv:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1azv

Go back to Zinc Binding Sites List in 1azv
Zinc binding site 1 out of 2 in the Familial Als Mutant G37R Cuznsod (Human)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Familial Als Mutant G37R Cuznsod (Human) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn155

b:26.9
occ:1.00
OD1 A:ASP83 1.9 24.4 1.0
ND1 A:HIS63 1.9 20.8 1.0
ND1 A:HIS80 2.1 17.1 1.0
ND1 A:HIS71 2.3 29.0 1.0
CG A:ASP83 2.7 23.9 1.0
OD2 A:ASP83 2.8 27.7 1.0
CE1 A:HIS63 2.9 23.8 1.0
CE1 A:HIS80 2.9 16.3 1.0
CG A:HIS63 3.0 23.9 1.0
CE1 A:HIS71 3.1 28.8 1.0
CG A:HIS80 3.1 18.0 1.0
CB A:HIS63 3.4 21.5 1.0
CG A:HIS71 3.4 26.8 1.0
CB A:HIS80 3.6 17.3 1.0
CB A:HIS71 3.8 25.2 1.0
O A:LYS136 3.9 32.9 1.0
NE2 A:HIS63 4.0 28.6 1.0
NE2 A:HIS80 4.0 20.0 1.0
CD2 A:HIS63 4.1 24.4 1.0
CD2 A:HIS80 4.1 17.9 1.0
CB A:ASP83 4.2 23.8 1.0
CA A:HIS71 4.2 26.1 1.0
NE2 A:HIS71 4.3 28.6 1.0
CD2 A:HIS71 4.5 27.4 1.0
CA A:ASP83 4.7 23.9 1.0
N A:HIS80 4.8 20.3 1.0
CA A:HIS80 4.8 21.1 1.0
N A:GLY72 4.8 26.8 1.0
O A:HOH418 4.8 32.8 1.0
CA A:HIS63 4.9 22.4 1.0
N A:ASP83 4.9 22.9 1.0
C A:LYS136 4.9 33.4 1.0

Zinc binding site 2 out of 2 in 1azv

Go back to Zinc Binding Sites List in 1azv
Zinc binding site 2 out of 2 in the Familial Als Mutant G37R Cuznsod (Human)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Familial Als Mutant G37R Cuznsod (Human) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn155

b:21.0
occ:1.00
ND1 B:HIS63 1.8 20.3 1.0
OD1 B:ASP83 1.8 16.1 1.0
ND1 B:HIS80 2.2 16.6 1.0
ND1 B:HIS71 2.2 17.2 1.0
CE1 B:HIS63 2.6 25.9 1.0
CG B:ASP83 2.6 17.8 1.0
OD2 B:ASP83 2.7 20.2 1.0
CG B:HIS63 3.0 21.7 1.0
CE1 B:HIS80 3.1 18.9 1.0
CE1 B:HIS71 3.1 16.0 1.0
CG B:HIS80 3.2 15.4 1.0
CG B:HIS71 3.3 17.7 1.0
CB B:HIS63 3.5 19.0 1.0
CB B:HIS80 3.6 17.6 1.0
CB B:HIS71 3.7 17.7 1.0
NE2 B:HIS63 3.8 28.7 1.0
O B:LYS136 3.8 24.2 1.0
CD2 B:HIS63 4.0 24.6 1.0
CA B:HIS71 4.0 20.3 1.0
CB B:ASP83 4.1 16.3 1.0
NE2 B:HIS80 4.2 16.9 1.0
CD2 B:HIS80 4.2 16.0 1.0
NE2 B:HIS71 4.3 17.0 1.0
CD2 B:HIS71 4.4 15.6 1.0
CA B:ASP83 4.7 17.0 1.0
N B:HIS80 4.7 20.1 1.0
CA B:HIS80 4.8 18.9 1.0
N B:GLY72 4.8 18.3 1.0
C B:LYS136 4.8 25.4 1.0
O B:HOH413 4.9 27.0 1.0
N B:ASP83 4.9 15.1 1.0
C B:HIS71 5.0 20.1 1.0
N B:HIS71 5.0 21.3 1.0

Reference:

P.J.Hart, H.Liu, M.Pellegrini, A.M.Nersissian, E.B.Gralla, J.S.Valentine, D.Eisenberg. Subunit Asymmetry in the Three-Dimensional Structure of A Human Cuznsod Mutant Found in Familial Amyotrophic Lateral Sclerosis. Protein Sci. V. 7 545 1998.
ISSN: ISSN 0961-8368
PubMed: 9541385
Page generated: Wed Dec 16 02:45:19 2020

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