Zinc in PDB 9fdr: Crystal Structure of Human SIRT2 in Apo Form with Opened Selectivity Pocket

The structure of Crystal Structure of Human SIRT2 in Apo Form with Opened Selectivity Pocket, PDB code: 9fdr was solved by F.Friedrich, O.Einsle, M.Jung, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	54.51 / 1.25
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	35.932, 73.251, 54.76, 90, 95.52, 90
R / Rfree (%)	17.9 / 18.9

The binding sites of Zinc atom in the Crystal Structure of Human SIRT2 in Apo Form with Opened Selectivity Pocket (pdb code 9fdr). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Human SIRT2 in Apo Form with Opened Selectivity Pocket, PDB code: 9fdr:

Zinc binding site 1 out of 1 in the Crystal Structure of Human SIRT2 in Apo Form with Opened Selectivity Pocket


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Human SIRT2 in Apo Form with Opened Selectivity Pocket within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:15.9 occ:1.00 SG A:CYS195 2.3 17.6 1.0 SG A:CYS200 2.3 18.9 1.0 SG A:CYS224 2.3 16.1 1.0 SG A:CYS221 2.3 15.9 1.0 CB A:CYS200 3.1 18.1 1.0 CB A:CYS221 3.1 15.4 1.0 CB A:CYS195 3.1 15.4 1.0 CB A:CYS224 3.5 16.6 1.0 N A:CYS224 3.9 17.4 1.0 CA A:CYS224 4.2 17.0 1.0 CB A:ASP223 4.4 20.4 1.0 CB A:HIS202 4.4 17.8 1.0 CA A:CYS200 4.5 19.6 1.0 N A:ARG201 4.6 18.3 1.0 CA A:CYS221 4.6 17.2 1.0 N A:HIS202 4.6 18.7 1.0 CA A:CYS195 4.6 15.8 1.0 O A:HOH799 4.6 28.1 1.0 C A:CYS200 4.8 20.9 1.0 C A:ASP223 4.8 18.5 1.0 C A:CYS224 4.8 17.1 1.0 CB A:SER226 4.8 15.8 1.0 CB A:SER197 4.8 16.9 1.0 N A:GLN225 4.9 16.9 1.0 N A:SER226 4.9 16.4 1.0 N A:ASP223 4.9 18.9 1.0 CA A:ASP223 5.0 19.7 1.0

F.Friedrich, O.Einsle, M.Jung. Crystal Structure of Human SIRT2 in Apo Form with Opened Selectivity Pocket To Be Published.