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Zinc in PDB 9f7t: Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer

Enzymatic activity of Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer

All present enzymatic activity of Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer:
3.4.19.12;

Protein crystallography data

The structure of Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer, PDB code: 9f7t was solved by A.Camara-Artigas, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.95 / 2.05
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 140.637, 140.637, 141.434, 90, 90, 90
R / Rfree (%) 21 / 23.3

Other elements in 9f7t:

The structure of Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer also contains other interesting chemical elements:

Sodium (Na) 1 atom
Chlorine (Cl) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer (pdb code 9f7t). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer, PDB code: 9f7t:

Zinc binding site 1 out of 1 in 9f7t

Go back to Zinc Binding Sites List in 9f7t
Zinc binding site 1 out of 1 in the Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn404

b:70.8
occ:1.00
SG A:CYS193 2.3 80.3 1.0
SG A:CYS227 2.3 61.6 1.0
SG A:CYS190 2.3 68.7 1.0
SG A:CYS225 2.5 69.5 1.0
HB2 A:CYS193 2.8 107.9 1.0
HB3 A:CYS225 2.9 71.7 1.0
HB3 A:CYS227 3.0 76.2 1.0
CB A:CYS225 3.1 59.8 1.0
CB A:CYS193 3.2 90.0 1.0
HB3 A:CYS190 3.2 83.1 1.0
CB A:CYS190 3.2 69.3 1.0
CB A:CYS227 3.3 63.5 1.0
HB2 A:CYS190 3.3 83.1 1.0
H A:CYS227 3.3 80.6 1.0
HB2 A:CYS225 3.4 71.7 1.0
H A:CYS193 3.6 109.5 1.0
HB3 A:CYS193 3.8 107.9 1.0
HB A:THR192 3.9 95.8 1.0
HB2 A:CYS227 3.9 76.2 1.0
HB2 A:ARG229 4.0 77.3 1.0
N A:CYS193 4.0 91.3 1.0
N A:CYS227 4.0 67.2 1.0
HH11 A:ARG229 4.1 83.2 1.0
CA A:CYS193 4.2 87.1 1.0
CA A:CYS227 4.2 71.5 1.0
HD2 A:ARG229 4.3 77.7 1.0
H A:ARG229 4.4 72.4 1.0
HG22 A:THR192 4.5 94.4 1.0
CA A:CYS225 4.6 58.0 1.0
H A:THR226 4.6 73.4 1.0
H A:THR192 4.7 101.2 1.0
HA A:CYS193 4.7 104.5 1.0
CA A:CYS190 4.7 73.5 1.0
CB A:THR192 4.7 79.8 1.0
N A:THR226 4.8 61.2 1.0
HG3 A:ARG229 4.8 86.5 1.0
NH1 A:ARG229 4.8 69.3 1.0
HB2 A:ALA231 4.9 79.8 1.0
C A:THR192 4.9 85.5 1.0
CB A:ARG229 4.9 64.4 1.0
H A:GLY228 4.9 73.3 1.0
C A:CYS225 5.0 58.8 1.0
C A:CYS227 5.0 70.8 1.0

Reference:

A.Camara-Artigas, A.Camara-Artigas. N/A N/A.
Page generated: Fri Aug 22 17:27:02 2025

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