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Zinc in PDB 9baq: Cryoem Structure of DIM2-HP1-H3K9ME3-Dna Complex

Enzymatic activity of Cryoem Structure of DIM2-HP1-H3K9ME3-Dna Complex

All present enzymatic activity of Cryoem Structure of DIM2-HP1-H3K9ME3-Dna Complex:
2.1.1.37;

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryoem Structure of DIM2-HP1-H3K9ME3-Dna Complex (pdb code 9baq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryoem Structure of DIM2-HP1-H3K9ME3-Dna Complex, PDB code: 9baq:

Zinc binding site 1 out of 1 in 9baq

Go back to Zinc Binding Sites List in 9baq
Zinc binding site 1 out of 1 in the Cryoem Structure of DIM2-HP1-H3K9ME3-Dna Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryoem Structure of DIM2-HP1-H3K9ME3-Dna Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1302

b:196.9
occ:1.00
SG A:CYS637 2.1 164.0 1.0
ND1 A:HIS694 2.1 170.6 1.0
SG A:CYS692 2.1 170.9 1.0
SG A:CYS635 2.2 170.6 1.0
CB A:CYS637 2.7 163.8 1.0
CG A:HIS694 2.8 167.5 1.0
CE1 A:HIS694 3.0 169.2 1.0
CB A:HIS694 3.1 162.6 1.0
CB A:CYS635 3.3 149.0 1.0
CB A:CYS692 3.7 152.8 1.0
N A:HIS694 3.8 159.9 1.0
CD2 A:HIS694 3.9 167.6 1.0
CA A:CYS637 3.9 163.4 1.0
N A:CYS637 3.9 162.3 1.0
NE2 A:HIS694 4.0 168.2 1.0
CA A:HIS694 4.1 159.3 1.0
OD1 A:ASN695 4.6 162.9 1.0
CA A:CYS635 4.6 142.8 1.0
N A:ASN695 4.6 157.1 1.0
N A:GLN638 4.7 164.3 1.0
N A:TYR693 4.8 155.2 1.0
C A:CYS635 4.8 148.7 1.0
C A:CYS637 4.8 163.7 1.0
C A:HIS694 4.9 158.0 1.0
CA A:CYS692 4.9 148.1 1.0

Reference:

J.Song, Z.Shao. Cryoem Structure of DIM2-HP1-H3K9ME3-Dna Complex To Be Published.
Page generated: Fri Aug 22 16:22:03 2025

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