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Zinc in PDB, part 235 (files: 9361-9400), PDB 4p4d-4pkr

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 9361-9400 (PDB 4p4d-4pkr).
  1. 4p4d (Zn: 2) - X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1C
    Other atoms: Ca (1); Cl (1);
  2. 4p4e (Zn: 2) - X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor MP1D
    Other atoms: Ca (1); Cl (1);
  3. 4p4f (Zn: 2) - X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor Nc-2-40
    Other atoms: Ca (1); Cl (1);
  4. 4p4i (Zn: 2) - X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor T33
    Other atoms: Ca (1); Cl (1);
  5. 4p4j (Zn: 2) - X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with A Phosphoramidate Inhibitor T33D
    Other atoms: Ca (1); Cl (1);
  6. 4p53 (Zn: 1) - Vala (2-Epi-5-Epi-Valiolone Synthase) From Streptomyces Hygroscopicus Subsp. Jinggangensis 5008 with Nad+ and ZN2+ Bound
  7. 4p5o (Zn: 6) - Structure of An RBX1-UBC12~NEDD8-CUL1-DCN1 Complex: A Ring-E3- E2~Ubiquitin-Like Protein-Substrate Intermediate Trapped in Action
  8. 4p62 (Zn: 3) - Directed Evolution of A B3 Metallo-Beta-Lactamase Aim-1
  9. 4p65 (Zn: 2) - Crystal Structure of An Cyclohexylalanine Substituted Insulin Analog.
    Other atoms: Cl (2);
  10. 4p6p (Zn: 11) - Structure of Ribb Complexed with Inhibitor (4PEH) and Metal Ions
  11. 4p6r (Zn: 4) - Crystal Structure of Tyrosinase From Bacillus Megaterium with Tyrosine in the Active Site
  12. 4p6s (Zn: 6) - Crystal Structure of Tyrosinase From Bacillus Megaterium with L-Dopa in the Active Site
  13. 4p8e (Zn: 10) - Structure of Ribb Complexed with Substrate (RU5P) and Metal Ions
  14. 4p8q (Zn: 2) - Crystal Structure of Human Insulin Regulated Aminopeptidase with Alanine in Active Site
  15. 4p9c (Zn: 12) - Crystal Structure of Dcmp Deaminase From the Cyanophage S-TIM5 in Complex with Dcmp and Dump
  16. 4p9d (Zn: 6) - Crystal Structure of Dcmp Deaminase From the Cyanophage S-TIM5 in Complex with Dtmp and Dttp.
    Other atoms: Mg (6); Cl (3);
  17. 4p9e (Zn: 1) - Crystal Structure of Dcmp Deaminase From the Cyanophage S-TIM5 in Apo Form
    Other atoms: Cl (1);
  18. 4pa5 (Zn: 1) - Tgl - A Bacterial Spore Coat Transglutaminase - Cystamine Complex
  19. 4paw (Zn: 2) - Structure of Hypothetical Protein HP1257.
  20. 4pbe (Zn: 4) - Phosphotriesterase Variant REV6
    Other atoms: As (1);
  21. 4pbf (Zn: 4) - Phosphotriesterase Variant REV12
    Other atoms: As (2);
  22. 4pcn (Zn: 4) - Phosphotriesterase Variant R22
  23. 4pcp (Zn: 4) - Crystal Structure of Phosphotriesterase Variant R0
    Other atoms: As (2);
  24. 4pcz (Zn: 1) - Crystal Structure of A Complex Between R247G Llfpg Mutant and A Thf Containing Dna
  25. 4pd2 (Zn: 1) - Crystal Structure of A Complex Between A C248GH Llfpg Mutant and A Thf Containing Dna
  26. 4pe3 (Zn: 11) - Crystal Structure of A Trap Periplasmic Solute Binding Protein From Rhodobacter Sphaeroides (RSPH17029_3620, Target Efi-510199), Apo Open Structure
  27. 4pes (Zn: 2) - Crystal Structure of Insulin Degrading Enzyme Complexed with Inhibitor Tert-Butyl [(2S)-2-(2,5-Difluorophenyl)-3-(Quinolin-3-Yl) Propyl]Carbamate
    Other atoms: F (4);
  28. 4pf7 (Zn: 2) - Crystal Structure of Insulin Degrading Enzyme Complexed with Inhibitor
  29. 4pf9 (Zn: 2) - Crystal Structure of Insulin Degrading Enzyme Complexed with Inhibitor
  30. 4pfb (Zn: 5) - Crystal Structure of A Trap Periplasmic Solute Binding Protein From Fusobacterium Nucleatun (FN1258, Target Efi-510120) with Bound Sn- Glycerol-3-Phosphate
  31. 4pfc (Zn: 2) - Crystal Structure of Insulin Degrading Enzyme Complexed with Inhibitor
    Other atoms: F (2);
  32. 4phl (Zn: 2) - TBRPDEB1-Inhibitor Complex
    Other atoms: Mg (2); Cl (4);
  33. 4pht (Zn: 3) - Atpase Gspe in Complex with the Cytoplasmic Domain of Gspl From the Vibrio Vulnificus Type II Secretion System
    Other atoms: Mg (3);
  34. 4phw (Zn: 4) - Crystal Structure of PDE10A with 1H-Benzimidazol-2-Yl(4-((3- (Tetrahydro-2H-Pyran-4-Yl)-2-Pyridinyl)Oxy)Phenyl)Methanone
  35. 4pi2 (Zn: 5) - Crystal Structure of Particulate Methane Monooxygenase From Methylocystis Sp. Atcc 49242 (Rockwell) Soaked in Zinc
    Other atoms: As (1); Cu (3);
  36. 4pie (Zn: 1) - Crystal Structure of Human Adenovirus 2 Protease A Substrate Based Nitrile Inhibitor
    Other atoms: Cl (1);
  37. 4pj6 (Zn: 2) - Crystal Structure of Human Insulin Regulated Aminopeptidase with Lysine in Active Site
  38. 4pjo (Zn: 4) - Minimal U1 Snrnp
    Other atoms: Mg (20); K (6); Cl (1);
  39. 4pkq (Zn: 1) - Anthrax Toxin Lethal Factor with Bound Zinc
  40. 4pkr (Zn: 1) - Anthrax Toxin Lethal Factor with Bound Small Molecule Inhibitor 10
    Other atoms: F (1); Cl (1);
Page generated: Mon Dec 15 11:33:09 2025

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