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Zinc in PDB 8yb6: Type I-Ehnh Cascade Complex

Zinc Binding Sites:

The binding sites of Zinc atom in the Type I-Ehnh Cascade Complex (pdb code 8yb6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Type I-Ehnh Cascade Complex, PDB code: 8yb6:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 8yb6

Go back to Zinc Binding Sites List in 8yb6
Zinc binding site 1 out of 2 in the Type I-Ehnh Cascade Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Type I-Ehnh Cascade Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:83.2
occ:1.00
SG A:CYS301 2.3 54.7 1.0
SG A:CYS329 2.3 62.1 1.0
SG A:CYS332 2.3 63.6 1.0
SG A:CYS298 2.3 53.5 1.0
CB A:CYS332 3.2 55.9 1.0
CB A:CYS298 3.3 46.1 1.0
CB A:CYS301 3.3 45.9 1.0
CB A:CYS329 3.7 53.2 1.0
N A:CYS301 4.0 51.7 1.0
N A:CYS329 4.1 55.7 1.0
CA A:CYS301 4.2 50.5 1.0
N A:CYS332 4.2 54.9 1.0
CA A:CYS332 4.3 49.5 1.0
CA A:CYS329 4.4 56.2 1.0
CG1 A:VAL300 4.5 53.0 1.0
C A:CYS301 4.7 51.2 1.0
CA A:CYS298 4.7 45.8 1.0
CB A:ALA303 4.7 35.5 1.0
N A:LYS302 4.8 50.5 1.0

Zinc binding site 2 out of 2 in 8yb6

Go back to Zinc Binding Sites List in 8yb6
Zinc binding site 2 out of 2 in the Type I-Ehnh Cascade Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Type I-Ehnh Cascade Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Zn601

b:175.1
occ:1.00
SG J:CYS311 2.3 91.1 1.0
SG J:CYS215 2.3 87.9 1.0
SG J:CYS314 2.3 94.6 1.0
SG J:CYS218 2.3 84.2 1.0
CB J:CYS314 3.3 88.9 1.0
CB J:CYS218 3.5 85.4 1.0
N J:CYS314 3.5 92.3 1.0
CB J:CYS311 3.6 90.5 1.0
CA J:CYS314 3.9 90.0 1.0
CB J:CYS215 3.9 81.7 1.0
N J:CYS215 4.4 83.2 1.0
N J:GLY315 4.4 82.5 1.0
N J:CYS218 4.5 79.3 1.0
CB J:SER313 4.5 84.1 1.0
C J:CYS314 4.6 90.0 1.0
CA J:CYS218 4.6 82.5 1.0
C J:SER313 4.6 83.4 1.0
CA J:CYS215 4.7 81.3 1.0
N J:SER313 4.9 86.6 1.0
CA J:CYS311 4.9 90.1 1.0
CA J:SER313 4.9 84.0 1.0

Reference:

Z.Li, Z.Li. N/A N/A.
ISSN: ISSN 1097-2765
DOI: 10.1016/J.MOLCEL.2024.06.033
Page generated: Fri Aug 22 15:50:07 2025

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