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Zinc in PDB 8vwa: Cryoem Structure of A Ftsh Helical Assembly in the Presence of Atp

Other elements in 8vwa:

The structure of Cryoem Structure of A Ftsh Helical Assembly in the Presence of Atp also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryoem Structure of A Ftsh Helical Assembly in the Presence of Atp (pdb code 8vwa). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryoem Structure of A Ftsh Helical Assembly in the Presence of Atp, PDB code: 8vwa:

Zinc binding site 1 out of 1 in 8vwa

Go back to Zinc Binding Sites List in 8vwa
Zinc binding site 1 out of 1 in the Cryoem Structure of A Ftsh Helical Assembly in the Presence of Atp


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryoem Structure of A Ftsh Helical Assembly in the Presence of Atp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn801

b:65.0
occ:1.00
OD2 A:ASP500 2.3 25.9 1.0
NE2 A:HIS423 2.3 21.6 1.0
NE2 A:HIS427 2.3 19.5 1.0
CE1 A:HIS423 3.2 17.9 1.0
CD2 A:HIS427 3.2 16.4 1.0
CG A:ASP500 3.3 23.8 1.0
CD2 A:HIS423 3.3 19.3 1.0
CE1 A:HIS427 3.3 17.7 1.0
OD1 A:ASP500 3.6 26.9 1.0
ND1 A:HIS423 4.3 20.0 1.0
CG A:HIS427 4.4 17.8 1.0
CG A:HIS423 4.4 19.2 1.0
ND1 A:HIS427 4.4 19.3 1.0
CB A:ASP500 4.6 20.9 1.0
CA A:GLY482 4.7 14.5 1.0
O A:GLY496 4.7 22.6 1.0

Reference:

Y.Li, J.Zhu, Z.Zhang, J.Wei, F.Wang, G.Meisl, T.P.J.Knowles, E.H.Egelman, F.A.Tezcan. Transforming An Atp-Dependent Enzyme Into A Dissipative, Self-Assembling Material To Be Published.
Page generated: Fri Aug 22 14:53:49 2025

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