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Zinc in PDB 8rl6: Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006 - RECQL5 Local Refinement

Enzymatic activity of Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006 - RECQL5 Local Refinement

All present enzymatic activity of Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006 - RECQL5 Local Refinement:
3.6.4.12;

Zinc Binding Sites:

The binding sites of Zinc atom in the Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006 - RECQL5 Local Refinement (pdb code 8rl6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006 - RECQL5 Local Refinement, PDB code: 8rl6:

Zinc binding site 1 out of 1 in 8rl6

Go back to Zinc Binding Sites List in 8rl6
Zinc binding site 1 out of 1 in the Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006 - RECQL5 Local Refinement


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Dna Helicase RECQL5 in Complex with Homo Di-Gluebody G5-006 - RECQL5 Local Refinement within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn501

b:93.3
occ:1.00
HB2 A:CYS427 2.2 91.2 1.0
SG A:CYS411 2.3 67.9 1.0
SG A:CYS431 2.3 95.9 1.0
SG A:CYS434 2.3 70.3 1.0
SG A:CYS427 2.4 94.8 1.0
HB3 A:CYS431 2.6 88.9 1.0
HB2 A:CYS431 2.6 88.0 1.0
CB A:CYS431 2.7 89.6 1.0
CB A:CYS427 2.7 90.0 1.0
HD1 A:HIS413 2.8 68.3 1.0
HB2 A:HIS413 3.3 67.3 1.0
HB2 A:CYS411 3.3 65.1 1.0
H A:CYS427 3.3 90.9 1.0
HB3 A:CYS427 3.3 90.0 1.0
CB A:CYS411 3.4 64.9 1.0
ND1 A:HIS413 3.5 71.2 1.0
HB2 A:CYS434 3.6 74.4 1.0
H A:HIS413 3.6 67.3 1.0
HA A:CYS411 3.6 64.9 1.0
CB A:CYS434 3.7 73.0 1.0
N A:CYS427 3.9 93.7 1.0
CA A:CYS427 3.9 90.9 1.0
H A:CYS434 3.9 73.0 1.0
CA A:CYS411 4.0 64.5 1.0
H A:ARG412 4.1 69.1 1.0
CB A:HIS413 4.1 63.7 1.0
HB3 A:CYS411 4.2 65.5 1.0
CA A:CYS431 4.2 89.8 1.0
HB3 A:CYS434 4.2 74.3 1.0
CG A:HIS413 4.3 66.7 1.0
N A:HIS413 4.4 65.8 1.0
H A:ALA414 4.4 64.2 1.0
N A:ARG412 4.4 66.7 1.0
C A:CYS411 4.5 66.7 1.0
HA A:CYS427 4.5 90.6 1.0
CE1 A:HIS413 4.6 68.2 1.0
N A:CYS434 4.6 70.2 1.0
HA A:CYS431 4.6 88.3 1.0
O A:CYS427 4.7 93.1 1.0
CA A:CYS434 4.7 72.8 1.0
HE1 A:HIS413 4.7 68.4 1.0
HB3 A:HIS413 4.8 67.1 1.0
C A:CYS427 4.8 91.4 1.0
CA A:HIS413 4.8 64.0 1.0
C A:CYS431 4.9 87.7 1.0
HA A:ALA426 5.0 89.0 1.0
HB3 A:HIS433 5.0 71.2 1.0
N A:CYS431 5.0 89.8 1.0

Reference:

G.Yi, D.Mamalis, M.Ye, L.Carrique, M.Fairhead, H.Li, K.Duerr, P.Zhang, D.B.Sauer, F.Von Delft, B.G.Davis, R.J.C.Gilbert. Di-Gluebodies: Rigid Modular Nanobody Protein Assemblies Enabling Simultaneous Determination of High-Resolution Cryo-Em Structures To Be Published.
Page generated: Sun Feb 9 00:45:34 2025

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