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Zinc in PDB 8ol1: Cgas-Nucleosome in Complex with SPSB3-Elobc (Composite Structure)

Enzymatic activity of Cgas-Nucleosome in Complex with SPSB3-Elobc (Composite Structure)

All present enzymatic activity of Cgas-Nucleosome in Complex with SPSB3-Elobc (Composite Structure):
2.7.7.86;

Zinc Binding Sites:

The binding sites of Zinc atom in the Cgas-Nucleosome in Complex with SPSB3-Elobc (Composite Structure) (pdb code 8ol1). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cgas-Nucleosome in Complex with SPSB3-Elobc (Composite Structure), PDB code: 8ol1:

Zinc binding site 1 out of 1 in 8ol1

Go back to Zinc Binding Sites List in 8ol1
Zinc binding site 1 out of 1 in the Cgas-Nucleosome in Complex with SPSB3-Elobc (Composite Structure)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cgas-Nucleosome in Complex with SPSB3-Elobc (Composite Structure) within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Zn601

b:77.5
occ:1.00
NE2 K:HIS390 1.8 56.7 1.0
SG K:CYS396 2.2 91.7 1.0
SG K:CYS397 2.2 90.8 1.0
SG K:CYS404 2.2 64.5 1.0
CD2 K:HIS390 2.7 56.7 1.0
CE1 K:HIS390 3.0 56.7 1.0
CB K:CYS404 3.4 64.5 1.0
CB K:CYS397 3.5 90.8 1.0
CB K:CYS396 3.5 91.7 1.0
N K:CYS397 3.7 90.8 1.0
C K:CYS396 3.7 91.7 1.0
N K:CYS404 3.9 64.5 1.0
CG K:HIS390 3.9 56.7 1.0
O K:CYS396 4.0 91.7 1.0
ND1 K:HIS390 4.0 56.7 1.0
CA K:CYS404 4.1 64.5 1.0
CA K:CYS396 4.2 91.7 1.0
CA K:CYS397 4.2 90.8 1.0
O K:GLU402 4.3 115.8 1.0
O K:CYS404 4.3 64.5 1.0
C K:CYS404 4.6 64.5 1.0
C K:LYS403 4.7 92.0 1.0
CA K:LYS403 5.0 92.0 1.0

Reference:

P.B.Xu, A.Ablasser. Nuclear Degradation of Cgas Is Essential For Immune Homeostasis Nature 2024.
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-024-07112-W
Page generated: Fri Aug 22 11:49:41 2025

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