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Zinc in PDB 8izt: Crystal Structure of the N-Terminal Domain (Residues 1-121) of Mpxv A7

Protein crystallography data

The structure of Crystal Structure of the N-Terminal Domain (Residues 1-121) of Mpxv A7, PDB code: 8izt was solved by X.C.Ni, J.Lei, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.10 / 1.74
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 75.95, 31.263, 49.838, 90, 112.34, 90
R / Rfree (%) 17.3 / 20.6

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the N-Terminal Domain (Residues 1-121) of Mpxv A7 (pdb code 8izt). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of the N-Terminal Domain (Residues 1-121) of Mpxv A7, PDB code: 8izt:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 8izt

Go back to Zinc Binding Sites List in 8izt
Zinc binding site 1 out of 2 in the Crystal Structure of the N-Terminal Domain (Residues 1-121) of Mpxv A7


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the N-Terminal Domain (Residues 1-121) of Mpxv A7 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:27.8
occ:0.55
OD1 A:ASP17 2.1 36.1 1.0
O A:HOH354 2.2 33.9 1.0
CG A:ASP17 3.2 30.8 1.0
O A:HOH392 3.6 37.3 1.0
OD2 A:ASP17 3.6 36.2 1.0
O A:HOH404 4.2 36.5 1.0
O A:HOH409 4.3 35.2 1.0
CB A:ASP17 4.4 25.5 1.0
CA A:ASP17 4.9 21.5 1.0

Zinc binding site 2 out of 2 in 8izt

Go back to Zinc Binding Sites List in 8izt
Zinc binding site 2 out of 2 in the Crystal Structure of the N-Terminal Domain (Residues 1-121) of Mpxv A7


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of the N-Terminal Domain (Residues 1-121) of Mpxv A7 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn202

b:17.7
occ:1.00
OD1 A:ASP31 2.0 18.2 1.0
OD1 A:ASP33 2.2 23.8 1.0
O A:HOH395 2.2 20.3 1.0
OD2 A:ASP33 2.4 22.5 1.0
CG A:ASP33 2.6 18.0 1.0
CG A:ASP31 2.7 17.9 1.0
OD2 A:ASP31 2.9 18.7 1.0
N A:PHE34 4.0 13.9 1.0
CB A:ASP33 4.1 16.1 1.0
O A:HOH348 4.1 21.9 1.0
CB A:ASP31 4.2 16.4 1.0
O A:HOH412 4.3 25.1 1.0
CB A:PHE34 4.5 14.0 1.0
N A:ASP33 4.5 14.3 1.0
CA A:ASP33 4.7 14.5 1.0
C A:ASP33 4.7 13.7 1.0
CA A:ASP31 4.7 15.5 1.0
C A:ASP31 4.7 15.4 1.0
CA A:PHE34 4.8 13.4 1.0
O A:HOH371 4.9 18.4 1.0
O A:ASP31 5.0 15.3 1.0

Reference:

X.C.Ni, J.Lei. Crystal Structure of the N-Terminal Domain (Residues 1-121) of Mpxv A7 To Be Published.
Page generated: Fri Aug 22 11:17:33 2025

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