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Zinc in PDB 7boe: Bacterial 30S Ribosomal Subunit Assembly Complex State M (Consensus Refinement)

Other elements in 7boe:

The structure of Bacterial 30S Ribosomal Subunit Assembly Complex State M (Consensus Refinement) also contains other interesting chemical elements:

Magnesium (Mg) 152 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Bacterial 30S Ribosomal Subunit Assembly Complex State M (Consensus Refinement) (pdb code 7boe). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Bacterial 30S Ribosomal Subunit Assembly Complex State M (Consensus Refinement), PDB code: 7boe:

Zinc binding site 1 out of 1 in 7boe

Go back to Zinc Binding Sites List in 7boe
Zinc binding site 1 out of 1 in the Bacterial 30S Ribosomal Subunit Assembly Complex State M (Consensus Refinement)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Bacterial 30S Ribosomal Subunit Assembly Complex State M (Consensus Refinement) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn301

b:140.6
occ:1.00
NE2 B:HIS18 2.1 117.0 1.0
OD1 B:ASP204 2.4 101.4 1.0
OD2 B:ASP188 2.7 94.9 1.0
CB B:ASP188 3.1 92.1 1.0
CE1 B:HIS18 3.1 116.5 1.0
CG B:ASP204 3.1 97.0 1.0
CD2 B:HIS18 3.1 116.4 1.0
OD1 B:ASP205 3.1 102.8 1.0
OD2 B:ASP204 3.2 92.2 1.0
CG B:ASP188 3.3 94.1 1.0
OD1 B:ASN190 3.6 114.2 1.0
OD1 B:ASP165 3.8 94.6 1.0
CG B:ASP205 4.0 100.7 1.0
CG B:ASP165 4.1 93.5 1.0
ND1 B:HIS18 4.2 116.3 1.0
CG B:HIS18 4.2 115.9 1.0
OD2 B:ASP165 4.3 92.6 1.0
CG B:ASN190 4.3 114.4 1.0
OD2 B:ASP205 4.4 103.8 1.0
OD1 B:ASP188 4.5 94.0 1.0
ND2 B:ASN190 4.5 114.5 1.0
CB B:ASP204 4.6 94.1 1.0
CA B:ASP188 4.6 92.8 1.0
N B:ASP205 4.6 96.5 1.0
N B:ASP204 4.7 101.4 1.0
CB B:ASP165 4.9 98.0 1.0
CB B:ASP205 5.0 96.5 1.0

Reference:

A.Schedlbauer, I.Iturrioz, B.Ochoa-Lizarralde, T.Diercks, J.P.Lopez-Alonso, J.L.Lavin, T.Kaminishi, R.Capuni, N.Dhimole, E.De Astigarraga, D.Gil-Carton, P.Fucini, S.R.Connell. A Conserved Rrna Switch Is Central to Decoding Site Maturation on the Small Ribosomal Subunit. Sci Adv V. 7 2021.
ISSN: ESSN 2375-2548
PubMed: 34088665
DOI: 10.1126/SCIADV.ABF7547
Page generated: Tue Oct 29 17:41:31 2024

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