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Zinc in PDB 7bh9: Sars-Cov-2 Rbd-62 in Complex with ACE2 Peptidase Domain

Enzymatic activity of Sars-Cov-2 Rbd-62 in Complex with ACE2 Peptidase Domain

All present enzymatic activity of Sars-Cov-2 Rbd-62 in Complex with ACE2 Peptidase Domain:
3.4.17.23;

Zinc Binding Sites:

The binding sites of Zinc atom in the Sars-Cov-2 Rbd-62 in Complex with ACE2 Peptidase Domain (pdb code 7bh9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Sars-Cov-2 Rbd-62 in Complex with ACE2 Peptidase Domain, PDB code: 7bh9:

Zinc binding site 1 out of 1 in 7bh9

Go back to Zinc Binding Sites List in 7bh9
Zinc binding site 1 out of 1 in the Sars-Cov-2 Rbd-62 in Complex with ACE2 Peptidase Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Sars-Cov-2 Rbd-62 in Complex with ACE2 Peptidase Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn901

b:87.3
occ:1.00
OE1 A:GLU402 2.0 66.8 1.0
NE2 A:HIS378 2.1 65.8 1.0
NE2 A:HIS374 2.3 68.4 1.0
CD2 A:HIS374 3.0 68.4 1.0
CD2 A:HIS378 3.0 65.8 1.0
CE1 A:HIS378 3.1 65.8 1.0
CD A:GLU402 3.1 66.8 1.0
CE1 A:HIS374 3.4 68.4 1.0
OE2 A:GLU402 3.5 66.8 1.0
ND1 A:HIS378 4.2 65.8 1.0
CG A:HIS378 4.2 65.8 1.0
CG A:HIS374 4.2 68.4 1.0
ND1 A:HIS374 4.4 68.4 1.0
CG A:GLU402 4.4 66.8 1.0
OE2 A:GLU375 4.7 71.1 1.0
OE1 A:GLU375 4.8 71.1 1.0
CA A:GLU402 5.0 66.8 1.0

Reference:

J.Zahradnk, S.Marciano, M.Shemesh, E.Zoler, J.Chiaravalli, B.Meyer, O.Dym, N.Elad, G.Schreiber. Sars-Cov-2 Rbd in Vitro Evolution Follows Contagious Mutation Spread, Yet Generates An Able Infection Inhibitor To Be Published.
Page generated: Tue Oct 29 17:36:19 2024

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