Atomistry » Zinc » PDB 7aez-7aoe » 7agi
Atomistry »
  Zinc »
    PDB 7aez-7aoe »
      7agi »

Zinc in PDB 7agi: The Structure of Artemis Variant H35D

Protein crystallography data

The structure of The Structure of Artemis Variant H35D, PDB code: 7agi was solved by Y.Yosaatmadja, S.Goubin, J.A.Newman, S.M.M.Mukhopadhyay, A.A.Dannerfjord, N.A.Burgess-Brown, F.Von Delft, C.H.Arrowsmith, C.Bountra, O.Gileadi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.62 / 1.70
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 35.968, 48.046, 48.445, 82.43, 76.01, 87.34
R / Rfree (%) 19 / 21

Zinc Binding Sites:

The binding sites of Zinc atom in the The Structure of Artemis Variant H35D (pdb code 7agi). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Structure of Artemis Variant H35D, PDB code: 7agi:

Zinc binding site 1 out of 1 in 7agi

Go back to Zinc Binding Sites List in 7agi
Zinc binding site 1 out of 1 in the The Structure of Artemis Variant H35D


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Structure of Artemis Variant H35D within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:11.4
occ:1.00
ND1 A:HIS254 2.1 11.4 1.0
ND1 A:HIS228 2.2 13.1 1.0
SG A:CYS256 2.3 13.3 1.0
SG A:CYS272 2.3 13.1 1.0
CE1 A:HIS254 3.0 11.3 1.0
CE1 A:HIS228 3.0 13.7 1.0
CB A:CYS272 3.2 13.8 1.0
CG A:HIS254 3.3 11.0 1.0
CG A:HIS228 3.3 13.5 1.0
CB A:CYS256 3.3 13.6 1.0
CB A:HIS254 3.7 11.0 1.0
CB A:HIS228 3.7 13.5 1.0
NE2 A:HIS228 4.1 13.6 1.0
NE2 A:HIS254 4.2 11.4 1.0
N A:CYS272 4.2 14.4 1.0
CD2 A:HIS228 4.3 13.6 1.0
CD2 A:HIS254 4.3 11.3 1.0
CA A:CYS272 4.3 14.2 1.0
CB A:ARG249 4.5 17.8 1.0
N A:CYS256 4.5 13.7 1.0
CA A:CYS256 4.5 14.0 1.0
CA A:HIS254 4.7 11.2 1.0
CD2 A:LEU270 4.8 18.1 1.0
CB A:LEU270 4.8 18.6 1.0
O A:HOH569 4.9 34.6 1.0
CA A:ARG249 4.9 17.4 1.0

Reference:

Y.Yosaatmadja, S.Goubin, J.A.Newman, S.M.M.Mukhopadhyay, A.A.Dannerfjord, N.A.Burgess-Brown, F.Von Delft, C.H.Arrowsmith, C.Bountra, O.Gileadi. The Structure of Artemis Variant H35D To Be Published.
Page generated: Tue Oct 29 16:49:12 2024

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy