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Zinc in PDB, part 427 (files: 17041-17080), PDB 7ad8-7ako

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 17041-17080 (PDB 7ad8-7ako).
  1. 7ad8 (Zn: 6) - Core Tfiih-Xpa-Dna Complex with Modelled P62 Subunit
    Other atoms: Fe (4);
  2. 7adb (Zn: 2) - Transcription Termination Intermediate Complex 1 Delta Nusg
    Other atoms: F (15); Mg (6);
  3. 7adc (Zn: 2) - Transcription Termination Intermediate Complex 3 Delta Nusg
    Other atoms: F (15); Mg (6);
  4. 7add (Zn: 2) - Transcription Termination Intermediate Complex Iiia
    Other atoms: F (15); Mg (6);
  5. 7ade (Zn: 2) - Transcription Termination Complex Iva
    Other atoms: F (15); Mg (6);
  6. 7adh (Zn: 2) - Three-Dimensional Structure of Isonicotinimidylated Liver Alcohol Dehydrogenase
  7. 7adn (Zn: 1) - Apo Trna-Guanine Transglycosylase C158S/C281S/Y330C/H333A Mutant
  8. 7adu (Zn: 1) - Crystal Structure of the Prototype Foamy Virus (Pfv) Intasome in Complex with Magnesium and the Insti XZ440 (Compound 5J)
    Other atoms: Mg (2); F (2);
  9. 7adv (Zn: 1) - Crystal Structure of the Prototype Foamy Virus (Pfv) Intasome in Complex with Magnesium and the Insti XZ447 (Compound 6V)
    Other atoms: F (2); Mg (3);
  10. 7ae1 (Zn: 7) - Cryo-Em Structure of Human Rna Polymerase III Elongation Complex 1
    Other atoms: Fe (4); Mg (1);
  11. 7ae3 (Zn: 7) - Cryo-Em Structure of Human Rna Polymerase III Elongation Complex 3
    Other atoms: Fe (4); Mg (1);
  12. 7ae5 (Zn: 6) - Structure of Sedimentibacter Hydroxybenzoicus Vanillic Acid Decarboxylase (Shvdccd) in Open Form
    Other atoms: Rb (12);
  13. 7ae7 (Zn: 6) - Structure of Sedimentibacter Hydroxybenzoicus Vanillic Acid Decarboxylase (Shvdccd) in Open Form, with Truncated Shvdcd (V59X)
    Other atoms: Na (5);
  14. 7aea (Zn: 7) - Cryo-Em Structure of Human Rna Polymerase III Elongation Complex 2
    Other atoms: Fe (4); Mg (1);
  15. 7aeq (Zn: 1) - Human Carbonic Anhydrase II in Complex with 2,3,5,6-Tetrafluoro-4-(2- Hydroxyethylsulfanyl)-N-Methyl-Benzenesulfonamide
    Other atoms: F (4); Na (3);
  16. 7aes (Zn: 1) - Human Carbonic Anhydrase II in Complex with 2,3,5,6-Tetrafluoro-N- Methyl-4-Propylsulfanyl-Benzenesulfonamide
    Other atoms: F (4); Na (2);
  17. 7aez (Zn: 2) - Crystal Structure of the Metallo-Beta-Lactamase Ndm-7 with 407
    Other atoms: Na (1);
  18. 7af1 (Zn: 3) - The Structure of Artemis/SNM1C/DCLRE1C with 2 Zinc Ions
  19. 7af3 (Zn: 1) - Bacterial 30S Ribosomal Subunit Assembly Complex State M (Head Domain)
    Other atoms: Mg (51);
  20. 7af5 (Zn: 1) - Bacterial 30S Ribosomal Subunit Assembly Complex State I (Head Domain)
    Other atoms: Mg (52);
  21. 7af8 (Zn: 1) - Bacterial 30S Ribosomal Subunit Assembly Complex State E (Head Domain)
    Other atoms: Mg (51);
  22. 7afa (Zn: 1) - Bacterial 30S Ribosomal Subunit Assembly Complex State F (Head Domain)
    Other atoms: Mg (25);
  23. 7afd (Zn: 1) - Bacterial 30S Ribosomal Subunit Assembly Complex State A (Head Domain)
    Other atoms: Mg (22);
  24. 7afh (Zn: 1) - Bacterial 30S Ribosomal Subunit Assembly Complex State C (Head Domain)
    Other atoms: Mg (11);
  25. 7afk (Zn: 1) - Bacterial 30S Ribosomal Subunit Assembly Complex State D (Head Domain)
    Other atoms: Mg (12);
  26. 7afn (Zn: 1) - Bacterial 30S Ribosomal Subunit Assembly Complex State B (Head Domain)
    Other atoms: Mg (11);
  27. 7afs (Zn: 1) - The Structure of Artemis Variant D37A
    Other atoms: Ni (1);
  28. 7afu (Zn: 1) - The Structure of Artemis Variant H33A
  29. 7afx (Zn: 6) - Crystal Structure of the Metallo-Beta-Lactamase VIM2 with 139
    Other atoms: Cl (2);
  30. 7afy (Zn: 2) - Crystal Structure of the Metallo-Beta-Lactamase VIM1 with 1306
    Other atoms: Cl (2); Na (2);
  31. 7afz (Zn: 2) - L1 Metallo-B-Lactamase with Compound Ebl-1306
    Other atoms: Cl (1);
  32. 7agi (Zn: 1) - The Structure of Artemis Variant H35D
  33. 7agl (Zn: 1) - Crystal Structure of the Apo Form of the N-Acetylmuramyl-L-Alanine Amidase, AMI1, From Mycobacterium Abscessus.
  34. 7agm (Zn: 2) - Crystal Structure of the N-Acetylmuramyl-L-Alanine Amidase, AMI1, From Mycobacterium Smegmatis
  35. 7agn (Zn: 4) - Human Carbonic Anhydrase II in Complex with 4-(2-Aminoethylsulfanyl)- 2,3,5,6-Tetrafluoro-N-Methyl-Benzenesulfonamide
    Other atoms: Na (4); F (16);
  36. 7ago (Zn: 1) - Crystal Structure of the N-Acetylmuramyl-L-Alanine Amidase, AMI1, From Mycobacterium Abscessus Bound to L-Alanine-D-Isoglutamine
  37. 7ak5 (Zn: 1) - Cryo-Em Structure of Respiratory Complex I in the Deactive State From Mus Musculus at 3.2 A
    Other atoms: Fe (28);
  38. 7ak6 (Zn: 1) - Cryo-Em Structure of ND6-P25L Mutant Respiratory Complex I From Mus Musculus at 3.8 A
    Other atoms: Fe (28);
  39. 7akn (Zn: 1) - Thermolysin From Bacillus Thermoproteolyticus
    Other atoms: Ca (4);
  40. 7ako (Zn: 1) - Crystal Structure of CHK1 Kinase Domain in Complex with A Claspin Phosphopeptide
Page generated: Mon Dec 15 11:40:39 2025

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