Zinc in PDB 6qv5: Crystal Structure of the Chad Domain From the Plant Ricinus Communis

The structure of Crystal Structure of the Chad Domain From the Plant Ricinus Communis, PDB code: 6qv5 was solved by L.Lorenzo-Orts, M.Hothorn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.65 / 2.30
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	116.427, 116.427, 119.248, 90.00, 90.00, 120.00
R / Rfree (%)	23.2 / 24.2

The binding sites of Zinc atom in the Crystal Structure of the Chad Domain From the Plant Ricinus Communis (pdb code 6qv5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Chad Domain From the Plant Ricinus Communis, PDB code: 6qv5:

Zinc binding site 1 out of 1 in the Crystal Structure of the Chad Domain From the Plant Ricinus Communis


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Chad Domain From the Plant Ricinus Communis within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:64.9 occ:0.50 NE2 A:HIS136 1.9 59.6 1.0 NE2 A:HIS50 2.2 65.7 1.0 CE1 A:HIS136 2.6 59.3 1.0 CD2 A:HIS136 3.1 59.8 1.0 CD2 A:HIS50 3.2 66.0 1.0 CE1 A:HIS50 3.2 65.4 1.0 ND1 A:HIS136 3.9 60.0 1.0 CG A:HIS136 4.1 58.1 1.0 CG A:HIS50 4.3 64.5 1.0 ND1 A:HIS50 4.4 66.1 1.0 O A:HOH516 4.4 47.8 1.0 C2 A:EDO402 4.9 77.3 0.5 C1 A:EDO402 5.0 77.3 0.5

L.Lorenzo-Orts, U.Hohmann, J.Zhu, M.Hothorn. Molecular Characterization of Chad Domains As Inorganic Polyphosphate-Binding Modules. Life Sci Alliance V. 2 2019.
ISSN: ESSN 2575-1077
PubMed: 31133615
DOI: 10.26508/LSA.201900385