Zinc in PDB 6zhl: Crystal Structure of Staphylococcus Aureus Rsga Bound to Ppgpp.

The structure of Crystal Structure of Staphylococcus Aureus Rsga Bound to Ppgpp., PDB code: 6zhl was solved by D.J.Bennison, J.B.Rafferty, R.M.Corrigan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	57.73 / 1.94
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	50.45, 66.929, 114.158, 90, 90, 90
R / Rfree (%)	21.4 / 26.2

The binding sites of Zinc atom in the Crystal Structure of Staphylococcus Aureus Rsga Bound to Ppgpp. (pdb code 6zhl). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Staphylococcus Aureus Rsga Bound to Ppgpp., PDB code: 6zhl:

Zinc binding site 1 out of 1 in the Crystal Structure of Staphylococcus Aureus Rsga Bound to Ppgpp.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Staphylococcus Aureus Rsga Bound to Ppgpp. within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn302 b:23.3 occ:1.00 ND1 A:HIS252 2.2 20.7 1.0 SG A:CYS245 2.3 24.2 1.0 SG A:CYS258 2.3 24.1 1.0 SG A:CYS250 2.3 22.0 1.0 CE1 A:HIS252 3.0 20.2 1.0 CB A:CYS250 3.2 22.0 1.0 CG A:HIS252 3.3 20.2 1.0 CB A:CYS258 3.3 22.7 1.0 CB A:CYS245 3.4 26.8 1.0 CA A:CYS258 3.6 23.7 1.0 CA A:HIS252 3.7 22.3 1.0 CB A:HIS252 3.7 22.2 1.0 N A:HIS252 3.9 21.3 1.0 N A:ASN259 4.1 22.3 1.0 C A:CYS258 4.1 22.5 1.0 NE2 A:HIS252 4.2 19.0 1.0 N A:VAL260 4.3 24.9 1.0 CD2 A:HIS252 4.3 20.9 1.0 CB A:VAL260 4.3 24.2 1.0 O A:HOH459 4.4 21.8 1.0 CA A:CYS250 4.5 24.1 1.0 CG2 A:VAL260 4.5 23.4 1.0 C A:CYS250 4.5 23.0 1.0 O A:CYS250 4.5 20.5 1.0 CA A:CYS245 4.6 25.4 1.0 N A:CYS258 5.0 22.6 1.0 CA A:VAL260 5.0 25.7 1.0

D.J.Bennison, J.A.Nakamoto, T.D.Craggs, P.Milon, J.B.Rafferty, R.M.Corrigan. Control of Ribosome Biogenesis Via Interactions of the Stringent Response Alarmones (P)Ppgpp with Ra-Gtpases in Staphylococcus Aureus To Be Published.