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Zinc in PDB 6m2d: MUL1-Ring Domain

Enzymatic activity of MUL1-Ring Domain

All present enzymatic activity of MUL1-Ring Domain:
2.3.2.27;

Protein crystallography data

The structure of MUL1-Ring Domain, PDB code: 6m2d was solved by S.O.Lee, K.S.Ryu, S.-W.Chi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.67 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 59.226, 66.593, 68.271, 90, 90, 90
R / Rfree (%) 17.2 / 22.7

Zinc Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Zinc atom in the MUL1-Ring Domain (pdb code 6m2d). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 12 binding sites of Zinc where determined in the MUL1-Ring Domain, PDB code: 6m2d:
Jump to Zinc binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Zinc binding site 1 out of 12 in 6m2d

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Zinc binding site 1 out of 12 in the MUL1-Ring Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of MUL1-Ring Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:25.4
occ:1.00
SG A:CYS326 2.3 17.7 1.0
SG A:CYS323 2.4 17.7 1.0
SG A:CYS302 2.4 16.7 1.0
SG A:CYS305 2.4 17.0 1.0
HB2 A:CYS326 2.8 19.7 1.0
H A:CYS305 2.9 18.4 1.0
HB3 A:CYS305 3.0 18.3 1.0
HB3 A:CYS302 3.0 16.5 1.0
CB A:CYS326 3.1 19.7 1.0
CB A:CYS302 3.2 16.5 1.0
H A:CYS323 3.2 12.4 1.0
CB A:CYS305 3.3 18.3 1.0
HB2 A:CYS302 3.4 16.5 1.0
HB3 A:CYS323 3.5 15.6 1.0
HB A:VAL304 3.6 21.2 1.0
CB A:CYS323 3.6 15.6 1.0
N A:CYS305 3.6 18.4 1.0
H A:CYS326 3.7 18.0 1.0
HB3 A:CYS326 3.7 19.7 1.0
HB2 A:SER308 3.8 15.9 1.0
N A:CYS323 4.0 12.4 1.0
CA A:CYS305 4.1 17.2 1.0
HB2 A:CYS305 4.1 18.3 1.0
H A:SER308 4.1 16.3 1.0
O A:HOH548 4.2 28.0 1.0
N A:CYS326 4.2 18.0 1.0
CA A:CYS326 4.2 17.6 1.0
CA A:CYS323 4.3 15.5 1.0
H A:VAL304 4.3 17.6 1.0
HB2 A:CYS323 4.4 15.6 1.0
O A:HOH528 4.5 28.1 1.0
H A:LEU306 4.5 19.2 1.0
CB A:VAL304 4.5 21.2 1.0
H A:SER307 4.6 20.8 1.0
HA A:CYS326 4.6 17.6 1.0
CA A:CYS302 4.6 18.9 1.0
HA A:SER322 4.7 14.8 1.0
CB A:SER308 4.7 15.9 1.0
C A:VAL304 4.7 20.4 1.0
O A:HOH527 4.7 30.1 1.0
HA A:CYS305 4.8 17.2 1.0
C A:CYS323 4.8 15.8 1.0
O A:CYS323 4.8 18.1 1.0
OG A:SER322 4.9 16.4 1.0
N A:SER308 4.9 16.3 1.0
C A:CYS305 4.9 18.8 1.0
N A:LEU306 4.9 19.2 1.0
CA A:VAL304 5.0 14.3 1.0
N A:VAL304 5.0 17.6 1.0
HG12 A:VAL304 5.0 23.3 1.0

Zinc binding site 2 out of 12 in 6m2d

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Zinc binding site 2 out of 12 in the MUL1-Ring Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of MUL1-Ring Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn402

b:28.0
occ:1.00
ND1 A:HIS319 2.1 21.0 1.0
SG A:CYS336 2.3 17.9 1.0
SG A:CYS317 2.4 19.1 1.0
SG A:CYS339 2.4 19.6 1.0
HB2 A:HIS319 2.8 21.2 1.0
HB2 A:CYS317 2.9 23.3 1.0
HB3 A:CYS336 2.9 20.8 1.0
CB A:CYS336 3.0 20.8 1.0
CG A:HIS319 3.1 21.0 1.0
CE1 A:HIS319 3.1 22.7 1.0
H A:CYS339 3.1 18.2 1.0
HB2 A:CYS336 3.1 20.8 1.0
CB A:CYS317 3.2 23.3 1.0
HB3 A:CYS339 3.2 20.2 1.0
HE1 A:HIS319 3.3 22.7 1.0
CB A:HIS319 3.4 21.2 1.0
HB A:ILE338 3.4 22.3 1.0
CB A:CYS339 3.4 20.2 1.0
HB3 A:CYS317 3.5 23.3 1.0
N A:CYS339 3.7 18.2 1.0
H A:HIS319 3.8 18.4 1.0
HB3 A:HIS319 3.9 21.2 1.0
CA A:CYS339 4.2 21.4 1.0
NE2 A:HIS319 4.2 25.2 1.0
HB2 A:GLN341 4.2 29.8 1.0
CD2 A:HIS319 4.2 24.7 1.0
HB2 A:CYS339 4.2 20.2 1.0
H A:ILE338 4.2 20.7 1.0
CB A:ILE338 4.3 22.3 1.0
H A:GLN341 4.4 21.7 1.0
N A:HIS319 4.5 18.4 1.0
CA A:CYS336 4.5 16.9 1.0
CA A:CYS317 4.5 23.3 1.0
CA A:HIS319 4.5 19.6 1.0
HD2 A:PHE314 4.6 17.5 1.0
H A:ARG340 4.6 18.5 1.0
HB2 A:PHE314 4.6 20.5 1.0
HG22 A:ILE338 4.7 16.4 1.0
C A:ILE338 4.7 23.2 1.0
C A:CYS317 4.8 19.8 1.0
N A:ILE338 4.9 20.7 1.0
C A:CYS339 4.9 21.1 1.0
CA A:ILE338 4.9 18.8 1.0
HA A:CYS336 4.9 16.9 1.0
O A:HOH524 4.9 31.1 1.0
N A:ARG340 5.0 18.5 1.0
CG2 A:ILE338 5.0 16.4 1.0
HE2 A:HIS319 5.0 25.2 1.0
HG21 A:ILE338 5.0 16.4 1.0
HA A:CYS339 5.0 21.4 1.0
C A:CYS336 5.0 22.3 1.0

Zinc binding site 3 out of 12 in 6m2d

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Zinc binding site 3 out of 12 in the MUL1-Ring Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of MUL1-Ring Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn401

b:26.2
occ:1.00
SG B:CYS326 2.4 17.8 1.0
SG B:CYS323 2.4 15.4 1.0
SG B:CYS302 2.4 16.1 1.0
SG B:CYS305 2.4 19.5 1.0
H B:CYS305 2.8 17.7 1.0
HB2 B:CYS326 2.8 16.3 1.0
HB3 B:CYS305 2.9 22.0 1.0
HB3 B:CYS302 2.9 13.2 1.0
H B:CYS323 3.1 11.9 1.0
CB B:CYS302 3.1 13.2 1.0
CB B:CYS326 3.2 16.3 1.0
CB B:CYS305 3.2 22.0 1.0
HB2 B:CYS302 3.3 13.2 1.0
HB3 B:CYS323 3.4 16.1 1.0
CB B:CYS323 3.5 16.1 1.0
N B:CYS305 3.5 17.7 1.0
HB2 B:SER308 3.6 18.8 1.0
HB B:VAL304 3.6 15.5 1.0
H B:CYS326 3.7 17.9 1.0
HB3 B:CYS326 3.7 16.3 1.0
O B:HOH543 3.8 30.8 1.0
N B:CYS323 3.9 11.9 1.0
CA B:CYS305 3.9 16.9 1.0
HB2 B:CYS305 4.0 22.0 1.0
O C:HOH547 4.1 25.4 1.0
H B:VAL304 4.2 14.6 1.0
CA B:CYS323 4.3 14.8 1.0
N B:CYS326 4.3 17.9 1.0
HB2 B:CYS323 4.3 16.1 1.0
CA B:CYS326 4.3 17.2 1.0
H B:SER308 4.3 19.9 1.0
CB B:VAL304 4.5 15.5 1.0
CB B:SER308 4.5 18.8 1.0
H B:LEU306 4.6 18.5 1.0
CA B:CYS302 4.6 15.1 1.0
HA B:SER322 4.6 14.8 1.0
C B:VAL304 4.6 18.5 1.0
HA B:CYS305 4.7 16.9 1.0
HA B:CYS326 4.7 17.2 1.0
HG12 B:VAL304 4.8 20.3 1.0
OG B:SER322 4.8 15.3 1.0
H B:SER307 4.8 16.3 1.0
C B:CYS305 4.9 20.9 1.0
C B:CYS323 4.9 16.2 1.0
N B:VAL304 4.9 14.6 1.0
HB3 B:SER308 4.9 18.8 1.0
CA B:VAL304 4.9 15.3 1.0
C B:CYS302 5.0 17.5 1.0
N B:LEU306 5.0 18.5 1.0

Zinc binding site 4 out of 12 in 6m2d

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Zinc binding site 4 out of 12 in the MUL1-Ring Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of MUL1-Ring Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn402

b:27.7
occ:1.00
ND1 B:HIS319 2.1 16.9 1.0
SG B:CYS336 2.3 18.0 1.0
SG B:CYS339 2.4 21.8 1.0
SG B:CYS317 2.4 14.7 1.0
HB2 B:HIS319 2.8 15.0 1.0
HB2 B:CYS317 2.9 19.5 1.0
H B:CYS339 2.9 20.3 1.0
HB3 B:CYS336 3.0 19.4 1.0
CB B:CYS317 3.1 19.5 1.0
CB B:CYS336 3.1 19.4 1.0
CG B:HIS319 3.1 19.2 1.0
CE1 B:HIS319 3.1 19.5 1.0
HB2 B:CYS336 3.2 19.4 1.0
HE1 B:HIS319 3.3 19.5 1.0
HB3 B:CYS317 3.3 19.5 1.0
HB B:ILE338 3.4 24.2 1.0
CB B:HIS319 3.4 15.0 1.0
HB3 B:CYS339 3.4 24.9 1.0
CB B:CYS339 3.5 24.9 1.0
N B:CYS339 3.7 20.3 1.0
H B:HIS319 3.8 17.7 1.0
HB3 B:HIS319 3.9 15.0 1.0
CA B:CYS339 4.1 21.7 1.0
NE2 B:HIS319 4.2 21.3 1.0
CD2 B:HIS319 4.2 23.6 1.0
H B:ILE338 4.2 19.8 1.0
H B:ARG340 4.3 22.1 1.0
HB2 B:CYS339 4.3 24.9 1.0
CB B:ILE338 4.3 24.2 1.0
N B:HIS319 4.5 17.7 1.0
CA B:CYS317 4.5 17.9 1.0
H B:GLN341 4.5 22.5 1.0
CA B:CYS336 4.6 19.5 1.0
CA B:HIS319 4.6 16.7 1.0
HB2 B:PHE314 4.6 16.3 1.0
O B:HOH504 4.6 35.1 1.0
HB2 B:GLN341 4.7 27.8 1.0
C B:ILE338 4.7 23.0 1.0
N B:ARG340 4.7 22.1 1.0
O B:HOH517 4.7 17.8 1.0
HD2 B:PHE314 4.8 13.8 1.0
C B:CYS339 4.8 22.3 1.0
HG13 B:ILE338 4.8 24.1 1.0
C B:CYS317 4.9 20.0 1.0
N B:ILE338 4.9 19.8 1.0
H B:CYS317 4.9 17.1 1.0
CA B:ILE338 4.9 21.3 1.0
HG12 B:ILE338 4.9 24.1 1.0
HA B:CYS339 5.0 21.7 1.0
HA B:CYS336 5.0 19.5 1.0
CG1 B:ILE338 5.0 24.1 1.0

Zinc binding site 5 out of 12 in 6m2d

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Zinc binding site 5 out of 12 in the MUL1-Ring Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 5 of MUL1-Ring Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn401

b:27.2
occ:1.00
SG C:CYS326 2.3 17.9 1.0
SG C:CYS323 2.4 16.7 1.0
SG C:CYS302 2.4 14.7 1.0
SG C:CYS305 2.4 17.9 1.0
HB2 C:CYS326 2.8 16.4 1.0
H C:CYS305 2.9 18.9 1.0
HB3 C:CYS302 3.0 16.1 1.0
HB3 C:CYS305 3.0 20.9 1.0
CB C:CYS326 3.1 16.4 1.0
CB C:CYS302 3.1 16.1 1.0
H C:CYS323 3.2 14.4 1.0
CB C:CYS305 3.3 20.9 1.0
HB2 C:CYS302 3.3 16.1 1.0
HB3 C:CYS323 3.4 17.9 1.0
HB2 C:SER308 3.4 18.6 1.0
CB C:CYS323 3.5 17.9 1.0
HB C:VAL304 3.6 15.8 1.0
HB3 C:CYS326 3.6 16.4 1.0
H C:CYS326 3.7 13.8 1.0
N C:CYS305 3.7 18.9 1.0
N C:CYS323 4.0 14.4 1.0
HB2 C:CYS305 4.1 20.9 1.0
CA C:CYS305 4.1 19.9 1.0
N C:CYS326 4.2 13.8 1.0
CA C:CYS326 4.3 16.2 1.0
HB2 C:CYS323 4.3 17.9 1.0
CA C:CYS323 4.3 17.5 1.0
H C:SER308 4.3 18.6 1.0
H C:VAL304 4.4 18.9 1.0
CB C:SER308 4.4 18.6 1.0
H C:LEU306 4.4 18.2 1.0
O C:HOH530 4.5 25.5 1.0
CB C:VAL304 4.6 15.8 1.0
CA C:CYS302 4.6 15.0 1.0
HA C:CYS326 4.7 16.2 1.0
HA C:SER322 4.8 15.0 1.0
HB3 C:SER308 4.8 18.6 1.0
C C:VAL304 4.8 19.8 1.0
HA C:CYS305 4.9 19.9 1.0
N C:LEU306 4.9 18.2 1.0
HG12 C:VAL304 4.9 18.9 1.0
C C:CYS323 4.9 15.7 1.0
OG C:SER308 4.9 17.8 1.0
C C:CYS305 4.9 21.2 1.0

Zinc binding site 6 out of 12 in 6m2d

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Zinc binding site 6 out of 12 in the MUL1-Ring Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 6 of MUL1-Ring Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn402

b:31.9
occ:1.00
ND1 C:HIS319 2.1 22.1 1.0
SG C:CYS339 2.3 20.8 1.0
SG C:CYS336 2.4 20.4 1.0
SG C:CYS317 2.4 20.4 1.0
HB2 C:CYS317 2.8 19.3 1.0
HB2 C:HIS319 2.8 19.3 1.0
HB3 C:CYS336 3.0 22.7 1.0
CB C:CYS317 3.0 19.3 1.0
CB C:CYS336 3.0 22.7 1.0
HB2 C:CYS336 3.1 22.7 1.0
CE1 C:HIS319 3.1 25.7 1.0
CG C:HIS319 3.1 18.5 1.0
HB3 C:CYS339 3.2 26.2 1.0
HE1 C:HIS319 3.2 25.7 1.0
H C:CYS339 3.3 24.0 1.0
HB3 C:CYS317 3.3 19.3 1.0
CB C:CYS339 3.3 26.2 1.0
CB C:HIS319 3.5 19.3 1.0
HB C:ILE338 3.6 22.9 1.0
H C:HIS319 3.7 16.8 1.0
N C:CYS339 3.8 24.0 1.0
HB3 C:HIS319 4.0 19.3 1.0
HB2 C:CYS339 4.1 26.2 1.0
CA C:CYS339 4.1 27.2 1.0
NE2 C:HIS319 4.2 25.9 1.0
CD2 C:HIS319 4.2 22.6 1.0
H C:ILE338 4.3 28.1 1.0
HB3 C:GLN341 4.4 29.2 1.0
H C:GLN341 4.4 24.9 1.0
N C:HIS319 4.4 16.8 1.0
CA C:CYS317 4.4 18.6 1.0
CB C:ILE338 4.5 22.9 1.0
CA C:CYS336 4.5 24.7 1.0
CA C:HIS319 4.6 19.2 1.0
O C:HOH544 4.6 32.9 1.0
HB2 C:PHE314 4.7 18.6 1.0
C C:CYS317 4.7 22.3 1.0
C C:ILE338 4.8 26.6 1.0
C C:CYS339 4.8 30.1 1.0
H C:ARG340 4.8 26.8 1.0
HD2 C:PHE314 4.8 18.4 1.0
O C:HOH525 4.9 26.0 1.0
HA C:CYS336 4.9 24.7 1.0
HB2 C:GLN341 4.9 29.2 1.0
N C:ILE338 4.9 28.1 1.0
H C:CYS317 5.0 23.0 1.0
HE2 C:HIS319 5.0 25.9 1.0
CA C:ILE338 5.0 26.5 1.0
HA C:CYS339 5.0 27.2 1.0
HA C:CYS317 5.0 18.6 1.0

Zinc binding site 7 out of 12 in 6m2d

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Zinc binding site 7 out of 12 in the MUL1-Ring Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 7 of MUL1-Ring Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn401

b:28.7
occ:1.00
SG D:CYS326 2.3 19.5 1.0
SG D:CYS305 2.4 20.1 1.0
SG D:CYS302 2.4 16.9 1.0
SG D:CYS323 2.4 17.4 1.0
HB2 D:CYS326 2.9 19.7 1.0
HB3 D:CYS302 3.0 18.5 1.0
HB3 D:CYS305 3.0 25.0 1.0
H D:CYS305 3.1 21.3 1.0
CB D:CYS302 3.2 18.5 1.0
CB D:CYS326 3.2 19.7 1.0
H D:CYS323 3.3 15.6 1.0
CB D:CYS305 3.3 25.0 1.0
HB2 D:CYS302 3.3 18.5 1.0
HB3 D:CYS323 3.5 14.9 1.0
HB2 D:SER308 3.6 19.1 1.0
CB D:CYS323 3.6 14.9 1.0
HB D:VAL304 3.7 17.8 1.0
HB3 D:CYS326 3.7 19.7 1.0
N D:CYS305 3.7 21.3 1.0
H D:CYS326 3.9 17.1 1.0
N D:CYS323 4.0 15.6 1.0
HB2 D:CYS305 4.1 25.0 1.0
CA D:CYS305 4.1 22.3 1.0
H D:VAL304 4.4 18.1 1.0
HB2 D:CYS323 4.4 14.9 1.0
CA D:CYS323 4.4 18.0 1.0
CA D:CYS326 4.4 15.7 1.0
CB D:SER308 4.4 19.1 1.0
N D:CYS326 4.4 17.1 1.0
OG D:SER308 4.4 18.9 1.0
H D:SER308 4.5 19.5 1.0
CB D:VAL304 4.6 17.8 1.0
CA D:CYS302 4.6 16.9 1.0
H D:SER307 4.7 23.0 1.0
H D:LEU306 4.7 20.9 1.0
C D:VAL304 4.7 24.7 1.0
HA D:CYS326 4.8 15.7 1.0
HG D:SER322 4.8 21.5 1.0
HG12 D:VAL304 4.8 21.7 1.0
HA D:SER322 4.8 17.4 1.0
HA D:CYS305 4.9 22.3 1.0
OG D:SER322 4.9 21.5 1.0
O D:CYS323 4.9 16.2 1.0
HG D:SER308 4.9 18.9 1.0
C D:CYS323 4.9 15.2 1.0
C D:CYS305 4.9 23.2 1.0
N D:VAL304 5.0 18.1 1.0
N D:SER308 5.0 19.5 1.0
C D:CYS302 5.0 15.8 1.0
CA D:VAL304 5.0 20.7 1.0

Zinc binding site 8 out of 12 in 6m2d

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Zinc binding site 8 out of 12 in the MUL1-Ring Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 8 of MUL1-Ring Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn402

b:27.4
occ:1.00
ND1 D:HIS319 2.1 18.8 1.0
SG D:CYS336 2.3 20.2 1.0
SG D:CYS339 2.4 19.2 1.0
SG D:CYS317 2.4 18.1 1.0
HB2 D:HIS319 2.8 18.4 1.0
HB2 D:CYS317 2.9 21.2 1.0
HB3 D:CYS336 3.0 20.1 1.0
CE1 D:HIS319 3.0 27.2 1.0
CB D:CYS336 3.0 20.1 1.0
H D:CYS339 3.1 24.9 1.0
CG D:HIS319 3.1 22.7 1.0
HB2 D:CYS336 3.1 20.1 1.0
CB D:CYS317 3.2 21.2 1.0
HE1 D:HIS319 3.2 27.2 1.0
HB D:ILE338 3.3 23.3 1.0
HB3 D:CYS339 3.3 20.0 1.0
HB3 D:CYS317 3.4 21.2 1.0
CB D:HIS319 3.4 18.4 1.0
CB D:CYS339 3.4 20.0 1.0
N D:CYS339 3.7 24.9 1.0
H D:HIS319 3.8 18.8 1.0
HB3 D:HIS319 4.0 18.4 1.0
NE2 D:HIS319 4.1 24.1 1.0
CA D:CYS339 4.2 20.9 1.0
CD2 D:HIS319 4.2 26.3 1.0
HB2 D:CYS339 4.2 20.0 1.0
CB D:ILE338 4.2 23.3 1.0
H D:ILE338 4.3 24.6 1.0
HB2 D:GLN341 4.3 23.2 1.0
H D:GLN341 4.4 24.2 1.0
N D:HIS319 4.5 18.8 1.0
CA D:CYS336 4.5 23.1 1.0
HD2 D:PHE314 4.6 15.2 1.0
CA D:CYS317 4.6 16.4 1.0
CA D:HIS319 4.6 18.4 1.0
HB2 D:PHE314 4.7 18.0 1.0
H D:ARG340 4.7 22.5 1.0
C D:ILE338 4.7 26.4 1.0
HG13 D:ILE338 4.8 28.2 1.0
HG22 D:ILE338 4.8 24.8 1.0
CA D:ILE338 4.8 21.8 1.0
C D:CYS339 4.9 22.6 1.0
N D:ILE338 4.9 24.6 1.0
O D:HOH510 4.9 23.5 1.0
HA D:CYS336 4.9 23.1 1.0
HE2 D:HIS319 4.9 24.1 1.0
C D:CYS317 4.9 15.7 1.0
HG21 D:ILE338 4.9 24.8 1.0
HG12 D:ILE338 4.9 28.2 1.0
CG2 D:ILE338 4.9 24.8 1.0
CG1 D:ILE338 5.0 28.2 1.0
HA D:CYS339 5.0 20.9 1.0
C D:CYS336 5.0 22.2 1.0

Zinc binding site 9 out of 12 in 6m2d

Go back to Zinc Binding Sites List in 6m2d
Zinc binding site 9 out of 12 in the MUL1-Ring Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 9 of MUL1-Ring Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Zn401

b:29.1
occ:1.00
SG E:CYS326 2.3 19.7 1.0
SG E:CYS323 2.3 18.7 1.0
SG E:CYS302 2.4 15.9 1.0
SG E:CYS305 2.4 17.9 1.0
HB2 E:CYS326 2.8 19.3 1.0
HB3 E:CYS305 2.9 19.5 1.0
HB3 E:CYS302 3.0 20.5 1.0
H E:CYS305 3.1 18.6 1.0
CB E:CYS326 3.1 19.3 1.0
H E:CYS323 3.1 18.1 1.0
CB E:CYS302 3.2 20.5 1.0
CB E:CYS305 3.2 19.5 1.0
HB2 E:CYS302 3.4 20.5 1.0
HB3 E:CYS323 3.4 16.7 1.0
CB E:CYS323 3.5 16.7 1.0
H E:CYS326 3.6 18.3 1.0
HB E:VAL304 3.6 17.6 1.0
N E:CYS305 3.7 18.6 1.0
HB3 E:CYS326 3.7 19.3 1.0
HB2 E:SER308 3.9 16.3 1.0
N E:CYS323 3.9 18.1 1.0
HB2 E:CYS305 4.0 19.5 1.0
CA E:CYS305 4.0 21.2 1.0
N E:CYS326 4.2 18.3 1.0
CA E:CYS326 4.2 19.9 1.0
O E:HOH534 4.3 25.1 1.0
H E:VAL304 4.3 17.8 1.0
CA E:CYS323 4.3 16.8 1.0
HB2 E:CYS323 4.3 16.7 1.0
H E:SER308 4.4 18.2 1.0
H E:LEU306 4.5 20.8 1.0
CB E:VAL304 4.6 17.6 1.0
HB3 E:GLU325 4.6 21.1 1.0
CA E:CYS302 4.6 18.5 1.0
HA E:SER322 4.6 15.1 1.0
HA E:CYS326 4.6 19.9 1.0
C E:VAL304 4.7 19.5 1.0
H E:SER307 4.7 18.4 1.0
HA E:CYS305 4.8 21.2 1.0
CB E:SER308 4.8 16.3 1.0
C E:CYS305 4.9 18.1 1.0
C E:CYS323 4.9 18.6 1.0
N E:VAL304 4.9 17.8 1.0
N E:LEU306 4.9 20.8 1.0
CA E:VAL304 5.0 17.9 1.0
O E:CYS323 5.0 18.4 1.0
C E:CYS302 5.0 22.7 1.0

Zinc binding site 10 out of 12 in 6m2d

Go back to Zinc Binding Sites List in 6m2d
Zinc binding site 10 out of 12 in the MUL1-Ring Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 10 of MUL1-Ring Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Zn402

b:33.3
occ:1.00
ND1 E:HIS319 2.2 22.9 1.0
SG E:CYS339 2.3 26.3 1.0
SG E:CYS336 2.3 17.2 1.0
SG E:CYS317 2.4 21.0 1.0
HB2 E:CYS317 2.8 28.6 1.0
HB2 E:HIS319 2.9 20.8 1.0
HB3 E:CYS336 2.9 20.7 1.0
CB E:CYS336 3.0 20.7 1.0
H E:CYS339 3.0 23.8 1.0
HB2 E:CYS336 3.1 20.7 1.0
CB E:CYS317 3.1 28.6 1.0
HB3 E:CYS339 3.1 22.7 1.0
CE1 E:HIS319 3.1 26.0 1.0
CG E:HIS319 3.2 22.6 1.0
HE1 E:HIS319 3.2 26.0 1.0
CB E:CYS339 3.3 22.7 1.0
HB3 E:CYS317 3.4 28.6 1.0
CB E:HIS319 3.5 20.8 1.0
HB E:ILE338 3.7 21.1 1.0
N E:CYS339 3.7 23.8 1.0
H E:HIS319 3.8 23.2 1.0
HB2 E:CYS339 4.0 22.7 1.0
HB3 E:HIS319 4.0 20.8 1.0
CA E:CYS339 4.0 25.4 1.0
HD2 E:PHE314 4.2 20.2 1.0
NE2 E:HIS319 4.2 26.2 1.0
CD2 E:HIS319 4.3 23.5 1.0
H E:ILE338 4.4 21.3 1.0
HB2 E:GLN341 4.5 32.7 1.0
CA E:CYS336 4.5 18.6 1.0
CA E:CYS317 4.5 29.0 1.0
N E:HIS319 4.5 23.2 1.0
CB E:ILE338 4.6 21.1 1.0
HG22 E:ILE338 4.6 22.5 1.0
H E:GLN341 4.6 28.9 1.0
CA E:HIS319 4.6 23.8 1.0
O E:HOH522 4.7 28.8 1.0
HB2 E:PHE314 4.7 22.5 1.0
H E:ARG340 4.7 29.4 1.0
HE21 E:GLN341 4.8 40.0 1.0
C E:ILE338 4.8 26.3 1.0
C E:CYS339 4.8 28.9 1.0
C E:CYS317 4.8 24.9 1.0
HA E:CYS339 4.9 25.4 1.0
HA E:CYS336 4.9 18.6 1.0
HG3 E:GLN341 4.9 38.9 1.0
N E:ILE338 5.0 21.3 1.0
NE2 E:GLN341 5.0 40.0 1.0
CG2 E:ILE338 5.0 22.5 1.0
N E:ARG340 5.0 29.4 1.0

Reference:

S.O.Lee, K.S.Ryu, S.-W.Chi. Distinct Mechanism of MUL1-Ring Domain Simultaneously Recruiting E2 Enzyme and the Substrate P53-Tad Domain To Be Published.
Page generated: Tue Oct 29 02:52:37 2024

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