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Zinc in PDB, part 133 (files: 5281-5320), PDB 3esj-3f2c

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 5281-5320 (PDB 3esj-3f2c).
  1. 3esj (Zn: 1) - Crystal Structure of 2C-Methyl-D-Erythritol 2,4- Clycodiphosphate Synthase Complexed with Ligand
    Other atoms: Mg (1);
  2. 3esq (Zn: 1) - Crystal Structure of Calcium-Bound D,D-Heptose 1.7- Bisphosphate Phosphatase From E. Coli
    Other atoms: Ca (1);
  3. 3esr (Zn: 1) - Crystal Structure of D,D-HEPTOSE1.7-Bisphosphate Phosphatase From E. Coli in Complex with Calcium and Phosphate
    Other atoms: Ca (1);
  4. 3esw (Zn: 1) - Complex of Yeast Pngase with GLCNAC2-Iac.
  5. 3eu5 (Zn: 1) - Crystal Structure of Ftase(Alpha-Subunit; Beta-Subunit Delta C10) in Complex with Biotingpp
  6. 3euv (Zn: 1) - Crystal Structure of Ftase(Alpha-Subunit; Beta-Subunit Delta C10, W102T, Y154T) in Complex with Biotingpp
  7. 3ew8 (Zn: 1) - Crystal Structure Analysis of Human HDAC8 D101L Variant
    Other atoms: K (2);
  8. 3ewc (Zn: 1) - Crystal Structure of Adenosine Deaminase From Plasmodial Vivax in Complex with Mt-Coformycin
  9. 3ewd (Zn: 1) - Crystal Structure of Adenosine Deaminase Mutant (Delta ASP172) From Plasmodium Vivax in Complex with Mt-Coformycin
  10. 3ewf (Zn: 6) - Crystal Structure Analysis of Human HDAC8 H143A Variant Complexed with Substrate.
    Other atoms: K (8);
  11. 3ewj (Zn: 2) - Crystal Structure of Catalytic Domain of Tace with Carboxylate Inhibitor
  12. 3ex8 (Zn: 4) - Complex Structure of Bacillus Subtilis Ribg Reduction Mechanism in Riboflavin Biosynthesis
  13. 3exj (Zn: 2) - Crystal Structure of A P53 Core Tetramer Bound to Dna
  14. 3exl (Zn: 1) - Crystal Structure of A P53 Core Tetramer Bound to Dna
  15. 3eyd (Zn: 2) - Structure of Hcv NS3-4A Protease with An Inhibitor Derived From A Boronic Acid
  16. 3eyl (Zn: 2) - Crystal Structure of Xiap BIR3 Domain in Complex with A Smac-Mimetic Compound
  17. 3eyv (Zn: 4) - Anti-Lewis Y Fab Fragment with Lewis Y Antigen in the Presence of Zinc Ions
  18. 3eyw (Zn: 2) - Crystal Structure of the C-Terminal Domain of E. Coli Kefc in Complex with Keff
    Other atoms: Mg (1);
  19. 3eyx (Zn: 2) - Crystal Structure of Carbonic Anhydrase NCE103 From Saccharomyces Cerevisiae
  20. 3eyy (Zn: 2) - Structural Basis For the Specialization of Nur, A Nickel- Specific Fur Homologue, in Metal Sensing and Dna Recognition
    Other atoms: Ni (2); Cl (5);
  21. 3ez5 (Zn: 5) - Cocrystal Structure of Bacillus Fragment Dna Polymerase I with Duplex Dna , Dctp, and Zinc (Closed Form).
  22. 3ez8 (Zn: 1) - Crystal Structure of Endoglucanase CEL9A From the Thermoacidophilic Alicyclobacillus Acidocaldarius
    Other atoms: Ca (2);
  23. 3ezp (Zn: 2) - Crystal Structure Analysis of Human HDAC8 D101N Variant
    Other atoms: K (4);
  24. 3ezt (Zn: 2) - Crystal Structure Analysis of Human HDAC8 D101E Variant
    Other atoms: K (4);
  25. 3f06 (Zn: 2) - Crystal Structure Analysis of Human HDAC8 D101A Variant.
    Other atoms: K (4);
  26. 3f07 (Zn: 4) - Crystal Structure Analysis of Human HDAC8 Complexed with Apha in A New Monoclinic Crystal Form
    Other atoms: K (6);
  27. 3f0d (Zn: 6) - High Resolution Crystal Structure of 2C-Methyl-D-Erythritol 2,4-Cyclodiphosphatase Synthase From Burkholderia Pseudomallei
  28. 3f0e (Zn: 3) - Crystal Structure of 2C-Methyl-D-Erythritol 2,4- Cyclodiphosphate Synthase From Burkholderia Pseudomallei
    Other atoms: Mg (1);
  29. 3f0f (Zn: 3) - Co-Crystal Structure of 2C-Methyl-D-Erythritol 2,4- Cyclodiphosphate Synthase From Burkholderia Pseudomallei with Hydrolyzed Cdp
    Other atoms: Mg (1);
  30. 3f0g (Zn: 6) - Co-Crystal Structure of 2C-Methyl-D-Erythritol 2,4- Cyclodiphosphate Synthase with Cmp
  31. 3f0r (Zn: 3) - Crystal Structure Analysis of Human HDAC8 Complexed with Trichostatin A in A New Monoclinic Crystal Form
    Other atoms: K (6);
  32. 3f15 (Zn: 2) - Crystal Structure of the Catalytic Domain of Human MMP12 Complexed with the Inhibitor (S)-N-(2,3-Dihydroxypropyl)-4- Methoxy-N-(2-Nitroso-2-Oxoethyl)Benzenesulfonamide
    Other atoms: Ca (3);
  33. 3f16 (Zn: 2) - Crystal Structure of the Catalytic Domain of Human MMP12 Complexed with the Inhibitor (R)-N-(3-Hydroxy-1-Nitroso-1- Oxopropan-2-Yl)-4-Methoxybenzenesulfonamide
    Other atoms: Ca (3);
  34. 3f17 (Zn: 2) - Crystal Structure of the Catalytic Domain of Human MMP12 Complexed with the Inhibitor N-(2-Nitroso-2-Oxoethyl) Biphenyl-4-Sulfonamide
    Other atoms: Ca (3);
  35. 3f18 (Zn: 2) - Crystal Structure of the Catalytic Domain of Human MMP12 Complexed with the Inhibitor 4-Fluoro-N-(2-Hydroxyethyl)-N- (2-Nitroso-2-Oxoethyl)Benzenesulfonamide
    Other atoms: F (1); Ca (3);
  36. 3f19 (Zn: 2) - Crystal Structure of the Catalytic Domain of Human MMP12 Complexed with the Inhibitor 4-Fluoro-N-(2-Nitroso-2- Oxoethyl)Benzenesulfonamide
    Other atoms: F (1); Ca (3);
  37. 3f1a (Zn: 2) - Crystal Structure of the Catalytic Domain of Human MMP12 Complexed with the Inhibitor N-(2-Nitroso-2-Oxoethyl) Benzenesulfonamide
    Other atoms: Ca (3);
  38. 3f28 (Zn: 1) - Thermolysin Inhibition
    Other atoms: Ca (4);
  39. 3f2b (Zn: 1) - Dna Polymerase Polc From Geobacillus Kaustophilus Complex with Dna, Dgtp, Mg and Zn
    Other atoms: Mg (3);
  40. 3f2c (Zn: 1) - Dna Polymerase Polc From Geobacillus Kaustophilus Complex with Dna, Dgtp and Mn
    Other atoms: Mn (3);
Page generated: Mon Dec 15 11:29:15 2025

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