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Zinc in PDB 3f6g: Crystal Structure of the Regulatory Domain of Licms in Complexed with Isoleucine - Type II

Enzymatic activity of Crystal Structure of the Regulatory Domain of Licms in Complexed with Isoleucine - Type II

All present enzymatic activity of Crystal Structure of the Regulatory Domain of Licms in Complexed with Isoleucine - Type II:
2.3.1.182;

Protein crystallography data

The structure of Crystal Structure of the Regulatory Domain of Licms in Complexed with Isoleucine - Type II, PDB code: 3f6g was solved by P.Zhang, J.Ma, G.Zhao, J.Ding, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 61.315, 97.943, 39.974, 90.00, 91.38, 90.00
R / Rfree (%) 22.6 / 26.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Regulatory Domain of Licms in Complexed with Isoleucine - Type II (pdb code 3f6g). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of the Regulatory Domain of Licms in Complexed with Isoleucine - Type II, PDB code: 3f6g:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 3f6g

Go back to Zinc Binding Sites List in 3f6g
Zinc binding site 1 out of 2 in the Crystal Structure of the Regulatory Domain of Licms in Complexed with Isoleucine - Type II


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Regulatory Domain of Licms in Complexed with Isoleucine - Type II within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn358

b:23.7
occ:0.50
O B:HOH104 2.4 41.4 1.0
NE2 B:HIS408 2.4 25.9 1.0
ND1 B:HIS400 3.2 42.1 1.0
CD2 B:HIS408 3.3 23.4 1.0
CE1 B:HIS408 3.4 25.3 1.0
CB B:HIS400 3.8 33.4 1.0
CG B:HIS400 3.9 39.9 1.0
O B:HOH102 4.1 42.9 1.0
CE1 B:HIS400 4.2 44.2 1.0
CG B:HIS408 4.5 24.2 1.0
ND1 B:HIS408 4.5 25.5 1.0

Zinc binding site 2 out of 2 in 3f6g

Go back to Zinc Binding Sites List in 3f6g
Zinc binding site 2 out of 2 in the Crystal Structure of the Regulatory Domain of Licms in Complexed with Isoleucine - Type II


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of the Regulatory Domain of Licms in Complexed with Isoleucine - Type II within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn359

b:35.1
occ:0.50
NE2 A:HIS408 2.6 27.4 1.0
O A:HOH143 2.9 48.2 1.0
ND1 A:HIS400 3.1 46.1 1.0
CE1 A:HIS408 3.5 27.4 1.0
CD2 A:HIS408 3.5 23.8 1.0
CE1 A:HIS400 3.9 47.3 1.0
CG A:HIS400 3.9 41.4 1.0
CB A:HIS400 4.2 36.2 1.0
ND1 A:HIS408 4.6 26.7 1.0
CG A:HIS408 4.7 24.0 1.0
CE1 B:HIS400 4.9 44.2 1.0
NE2 A:HIS400 4.9 44.3 1.0
CD2 A:HIS400 5.0 42.6 1.0

Reference:

P.Zhang, J.Ma, Z.Zhang, M.Zha, H.Xu, G.Zhao, J.Ding. Molecular Basis of the Inhibitor Selectivity and Insights Into the Feedback Inhibition Mechanism of Citramalate Synthase From Leptospira Interrogans Biochem.J. V. 421 133 2009.
ISSN: ISSN 0264-6021
PubMed: 19351325
DOI: 10.1042/BJ20090336
Page generated: Thu Oct 24 13:03:58 2024

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